1h1n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 6 November 2024) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1h1n.jpg|left|200px]]<br /><applet load="1h1n" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1h1n, resolution 1.12&Aring;" />
 
-
'''ATOMIC RESOLUTION STRUCTURE OF THE MAJOR ENDOGLUCANASE FROM THERMOASCUS AURANTIACUS'''<br />
 
-
==Overview==
+
==Atomic resolution structure of the major endoglucanase from Thermoascus aurantiacus==
 +
<StructureSection load='1h1n' size='340' side='right'caption='[[1h1n]], [[Resolution|resolution]] 1.12&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1h1n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoascus_aurantiacus Thermoascus aurantiacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H1N FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.12&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h1n OCA], [https://pdbe.org/1h1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h1n RCSB], [https://www.ebi.ac.uk/pdbsum/1h1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h1n ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8TG26_THEAU Q8TG26_THEAU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h1/1h1n_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h1n ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
The crystal structure of the major endoglucanase from the thermophilic fungus Thermoascus aurantiacus was determined by single isomorphous replacement at 1.12A resolution. The full sequence supports the classification of the protein in a subgroup of glycoside hydrolase family 5 for which no structural data are available yet. The active site shows eight critical residues, strictly conserved within family 5. In addition, aromatic residues that line the substrate-binding cleft and that are possibly involved in substrate-binding are identified. A number of residues seem to be conserved among members of the subtype, including a disulphide bridge between Cys212 and Cys249.
The crystal structure of the major endoglucanase from the thermophilic fungus Thermoascus aurantiacus was determined by single isomorphous replacement at 1.12A resolution. The full sequence supports the classification of the protein in a subgroup of glycoside hydrolase family 5 for which no structural data are available yet. The active site shows eight critical residues, strictly conserved within family 5. In addition, aromatic residues that line the substrate-binding cleft and that are possibly involved in substrate-binding are identified. A number of residues seem to be conserved among members of the subtype, including a disulphide bridge between Cys212 and Cys249.
-
==About this Structure==
+
Atomic resolution structure of the major endoglucanase from Thermoascus aurantiacus.,Van Petegem F, Vandenberghe I, Bhat MK, Van Beeumen J Biochem Biophys Res Commun. 2002 Aug 9;296(1):161-6. PMID:12147244<ref>PMID:12147244</ref>
-
1H1N is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermoascus_aurantiacus Thermoascus aurantiacus]. Active as [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H1N OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
Atomic resolution structure of the major endoglucanase from Thermoascus aurantiacus., Van Petegem F, Vandenberghe I, Bhat MK, Van Beeumen J, Biochem Biophys Res Commun. 2002 Aug 9;296(1):161-6. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12147244 12147244]
+
</div>
-
[[Category: Cellulase]]
+
<div class="pdbe-citations 1h1n" style="background-color:#fffaf0;"></div>
-
[[Category: Single protein]]
+
-
[[Category: Thermoascus aurantiacus]]
+
-
[[Category: Beeumen, J Van.]]
+
-
[[Category: Bhat, M K.]]
+
-
[[Category: Petegem, F Van.]]
+
-
[[Category: Vandenberghe, I.]]
+
-
[[Category: endoglucanase]]
+
-
[[Category: family 5]]
+
-
[[Category: glycosyl hydrolase]]
+
-
[[Category: subtype]]
+
-
[[Category: thermophile]]
+
-
[[Category: thermophilic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:56:22 2008''
+
==See Also==
 +
*[[Glucanase 3D structures|Glucanase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermoascus aurantiacus]]
 +
[[Category: Bhat MK]]
 +
[[Category: Van Beeumen J]]
 +
[[Category: Van Petegem F]]
 +
[[Category: Vandenberghe I]]

Current revision

Atomic resolution structure of the major endoglucanase from Thermoascus aurantiacus

PDB ID 1h1n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools