1qk1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:47, 13 December 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1qk1.png|left|200px]]
 
-
{{STRUCTURE_1qk1| PDB=1qk1 | SCENE= }}
+
==CRYSTAL STRUCTURE OF HUMAN UBIQUITOUS MITOCHONDRIAL CREATINE KINASE==
 +
<StructureSection load='1qk1' size='340' side='right'caption='[[1qk1]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1qk1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QK1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QK1 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qk1 OCA], [https://pdbe.org/1qk1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qk1 RCSB], [https://www.ebi.ac.uk/pdbsum/1qk1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qk1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KCRU_HUMAN KCRU_HUMAN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qk/1qk1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qk1 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Creatine kinase (CK), catalyzing the reversible trans-phosphorylation between ATP and creatine, plays a key role in the energy metabolism of cells with high and fluctuating energy requirements. We have solved the X-ray structure of octameric human ubiquitous mitochondrial CK (uMtCK) at 2.7 A resolution, representing the first human CK structure. The structure is very similar to the previously determined structure of sarcomeric mitochondrial CK (sMtCK). The cuboidal octamer has 422 point group symmetry with four dimers arranged along the fourfold axis and a central channel of approximately 20 A diameter, which extends through the whole octamer. Structural differences with respect to sMtCK are found in isoform-specific regions important for octamer formation and membrane binding. Octameric uMtCK is stabilized by numerous additional polar interactions between the N-termini of neighboring dimers, which extend into the central channel and form clamp-like structures, and by a pair of salt bridges in the hydrophobic interaction patch. The five C-terminal residues of uMtCK, carrying positive charges likely to be involved in phospholipid-binding, are poorly defined by electron density, indicating a more flexible region than the corresponding one in sMtCK. The structural differences between uMtCK and sMtCK are consistent with biochemical studies on octamer stability and membrane binding of the two isoforms.
-
===CRYSTAL STRUCTURE OF HUMAN UBIQUITOUS MITOCHONDRIAL CREATINE KINASE===
+
Crystal structure of human ubiquitous mitochondrial creatine kinase.,Eder M, Fritz-Wolf K, Kabsch W, Wallimann T, Schlattner U Proteins. 2000 May 15;39(3):216-25. PMID:10737943<ref>PMID:10737943</ref>
-
{{ABSTRACT_PUBMED_10737943}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1qk1" style="background-color:#fffaf0;"></div>
-
[[1qk1]] is a 8 chain structure of [[Creatine Kinase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QK1 OCA].
+
==See Also==
==See Also==
-
*[[Creatine Kinase|Creatine Kinase]]
+
*[[Creatine kinase 3D structures|Creatine kinase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:010737943</ref><ref group="xtra">PMID:008692275</ref><ref group="xtra">PMID:012093755</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Creatine kinase]]
+
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Eder, M.]]
+
[[Category: Large Structures]]
-
[[Category: Fritz-Wolf, K.]]
+
[[Category: Eder M]]
-
[[Category: Kabsch, W.]]
+
[[Category: Fritz-Wolf K]]
-
[[Category: Schlattner, U.]]
+
[[Category: Kabsch W]]
-
[[Category: Wallimann, T.]]
+
[[Category: Schlattner U]]
-
[[Category: Cancer]]
+
[[Category: Wallimann T]]
-
[[Category: Cellular energy metabolism]]
+
-
[[Category: Guanidino kinase]]
+
-
[[Category: Mitochondrial creatine kinase]]
+
-
[[Category: Mitochondrial permeability transition]]
+
-
[[Category: Octamer stability]]
+

Current revision

CRYSTAL STRUCTURE OF HUMAN UBIQUITOUS MITOCHONDRIAL CREATINE KINASE

PDB ID 1qk1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools