This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1nqn
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1nqn.png|left|200px]] | ||
| - | + | ==Structure of Avm-W110K (W110K mutant of avidin)== | |
| - | + | <StructureSection load='1nqn' size='340' side='right'caption='[[1nqn]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1nqn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NQN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NQN FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nqn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nqn OCA], [https://pdbe.org/1nqn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nqn RCSB], [https://www.ebi.ac.uk/pdbsum/1nqn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nqn ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1nqn]] is a 2 chain structure | + | == Function == |
| + | [https://www.uniprot.org/uniprot/AVID_CHICK AVID_CHICK] The biological function of avidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of avidin). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/1nqn_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nqn ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Avidin|Avidin]] | + | *[[Avidin 3D structures|Avidin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Gallus gallus]] | [[Category: Gallus gallus]] | ||
| - | [[Category: Bayer | + | [[Category: Large Structures]] |
| - | [[Category: Eisenberg-Domovich | + | [[Category: Bayer EA]] |
| - | [[Category: Kulomaa | + | [[Category: Eisenberg-Domovich Y]] |
| - | [[Category: Laitinen | + | [[Category: Kulomaa MS]] |
| - | [[Category: Livnah | + | [[Category: Laitinen OH]] |
| - | [[Category: Pazy | + | [[Category: Livnah O]] |
| - | [[Category: Wilchek | + | [[Category: Pazy Y]] |
| - | + | [[Category: Wilchek M]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Structure of Avm-W110K (W110K mutant of avidin)
| |||||||||||
