This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1m03

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 10 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1m03.png|left|200px]]
 
-
{{STRUCTURE_1m03| PDB=1m03 | SCENE= }}
+
==Mutant Streptomyces plicatus beta-hexosaminidase (D313A) in complex with product (GlcNAc)==
-
 
+
<StructureSection load='1m03' size='340' side='right'caption='[[1m03]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===Mutant Streptomyces plicatus beta-hexosaminidase (D313A) in complex with product (GlcNAc)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1m03]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_plicatus Streptomyces plicatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M03 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M03 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12171933}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m03 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m03 OCA], [https://pdbe.org/1m03 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m03 RCSB], [https://www.ebi.ac.uk/pdbsum/1m03 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m03 ProSAT]</span></td></tr>
-
[[1m03]] is a 1 chain structure of [[Beta-Hexosaminidase]] with sequence from [http://en.wikipedia.org/wiki/Streptomyces_plicatus Streptomyces plicatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M03 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O85361_STRPL O85361_STRPL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m0/1m03_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m03 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
-
 
+
*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
-
==Reference==
+
*[[Beta-N-acetylhexosaminidase 3D structures|Beta-N-acetylhexosaminidase 3D structures]]
-
<ref group="xtra">PMID:012171933</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Beta-N-acetylhexosaminidase]]
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Streptomyces plicatus]]
[[Category: Streptomyces plicatus]]
-
[[Category: James, M N.G.]]
+
[[Category: James MNG]]
-
[[Category: Mark, B L.]]
+
[[Category: Mark BL]]
-
[[Category: Vocadlo, D J.]]
+
[[Category: Vocadlo DJ]]
-
[[Category: Williams, S J.]]
+
[[Category: Williams SJ]]
-
[[Category: Withers, S G.]]
+
[[Category: Withers SG]]
-
[[Category: Beta-hexosaminidase]]
+
-
[[Category: Family 20 glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Substrate assisted catalysis]]
+

Current revision

Mutant Streptomyces plicatus beta-hexosaminidase (D313A) in complex with product (GlcNAc)

PDB ID 1m03

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1m03"
Personal tools