This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1f4w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:10, 20 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1f4w.png|left|200px]]
 
-
{{STRUCTURE_1f4w| PDB=1f4w | SCENE= }}
+
==CRYSTAL STRUCTURE OF AN ANTI-CARBOHYDRATE ANTIBODY DIRECTED AGAINST VIBRIO CHOLERAE O1 IN COMPLEX WITH ANTIGEN==
-
 
+
<StructureSection load='1f4w' size='340' side='right'caption='[[1f4w]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF AN ANTI-CARBOHYDRATE ANTIBODY DIRECTED AGAINST VIBRIO CHOLERAE O1 IN COMPLEX WITH ANTIGEN===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1f4w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F4W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F4W FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10880560}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f4w OCA], [https://pdbe.org/1f4w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f4w RCSB], [https://www.ebi.ac.uk/pdbsum/1f4w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f4w ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1f4w]] is a 2 chain structure of [[Antibody]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F4W OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/1f4w_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f4w ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Antibody|Antibody]]
+
*[[Antibody 3D structures|Antibody 3D structures]]
-
 
+
*[[Sandbox 20009|Sandbox 20009]]
-
==Reference==
+
*[[3D structures of non-human antibody|3D structures of non-human antibody]]
-
<ref group="xtra">PMID:010880560</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Alzari, P M.]]
+
[[Category: Alzari PM]]
-
[[Category: Souchon, H.]]
+
[[Category: Souchon H]]
-
[[Category: Anti-carbohydrate antibody]]
+
-
[[Category: Immune system]]
+

Current revision

CRYSTAL STRUCTURE OF AN ANTI-CARBOHYDRATE ANTIBODY DIRECTED AGAINST VIBRIO CHOLERAE O1 IN COMPLEX WITH ANTIGEN

PDB ID 1f4w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools