This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3otk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:18, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3otk.png|left|200px]]
 
-
{{STRUCTURE_3otk| PDB=3otk | SCENE= }}
+
==Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase==
-
 
+
<StructureSection load='3otk' size='340' side='right'caption='[[3otk]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
===Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3otk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OTK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OTK FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
[[3otk]] is a 4 chain structure of [[Glycosyltransferase]] and [[O-GlcNAc transferase]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OTK OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3otk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3otk OCA], [https://pdbe.org/3otk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3otk RCSB], [https://www.ebi.ac.uk/pdbsum/3otk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3otk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GCNT1_MOUSE GCNT1_MOUSE] Forms critical branches in O-glycans.<ref>PMID:7983056</ref>
==See Also==
==See Also==
-
*[[Glycosyltransferase|Glycosyltransferase]]
+
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
-
*[[O-GlcNAc transferase|O-GlcNAc transferase]]
+
*[[O-GlcNAc transferase 3D structures|O-GlcNAc transferase 3D structures]]
-
[[Category: Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N- acetylglucosaminyltransferase]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Pak, J E.]]
+
[[Category: Pak JE]]
-
[[Category: Rini, J M.]]
+
[[Category: Rini JM]]
-
[[Category: Glycosyltransferase]]
+
-
[[Category: Golgi]]
+
-
[[Category: Transferase]]
+

Current revision

Structure and mechanisim of core 2 beta1,6-n-acetylglucosaminyltransferase: a Metal-ion independent gt-a glycosyltransferase

PDB ID 3otk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools