This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3e89

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:45, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3e89.png|left|200px]]
 
-
{{STRUCTURE_3e89| PDB=3e89 | SCENE= }}
+
==Crystal Structure of the the open NaK channel-low Na+ complex==
-
 
+
<StructureSection load='3e89' size='340' side='right'caption='[[3e89]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Crystal Structure of the the open NaK channel-low Na+ complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3e89]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E89 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19098915}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e89 OCA], [https://pdbe.org/3e89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e89 RCSB], [https://www.ebi.ac.uk/pdbsum/3e89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e89 ProSAT]</span></td></tr>
-
[[3e89]] is a 2 chain structure of [[Potassium Channel]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E89 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q81HW2_BACCR Q81HW2_BACCR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/3e89_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e89 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Potassium Channel|Potassium Channel]]
+
*[[Potassium channel 3D structures|Potassium channel 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019098915</ref><references group="xtra"/>
+
[[Category: Bacillus cereus]]
[[Category: Bacillus cereus]]
-
[[Category: Alam, A.]]
+
[[Category: Large Structures]]
-
[[Category: Jiang, Y.]]
+
[[Category: Alam A]]
-
[[Category: 2-transmembrane helix channel]]
+
[[Category: Jiang Y]]
-
[[Category: Ionic channel]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Non-selective cation channel]]
+
-
[[Category: Tetrameric cation channel family]]
+

Current revision

Crystal Structure of the the open NaK channel-low Na+ complex

PDB ID 3e89

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools