3dze

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3dze" [edit=sysop:move=sysop])
Current revision (09:43, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3dze.png|left|200px]]
 
-
{{STRUCTURE_3dze| PDB=3dze | SCENE= }}
+
==Crystal structure of bovine coupling Factor B bound with cadmium==
-
 
+
<StructureSection load='3dze' size='340' side='right'caption='[[3dze]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
-
===Crystal structure of bovine coupling Factor B bound with cadmium===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dze]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZE FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_18768789}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dze OCA], [https://pdbe.org/3dze PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dze RCSB], [https://www.ebi.ac.uk/pdbsum/3dze PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dze ProSAT]</span></td></tr>
-
[[3dze]] is a 1 chain structure of [[ATP synthase]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZE OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ATP5S_BOVIN ATP5S_BOVIN] Involved in regulation of mitochondrial membrane ATP synthase. Necessary for H(+) conduction of ATP synthase. Facilitates energy-driven catalysis of ATP synthesis by blocking a proton leak through an alternative proton exit pathway.<ref>PMID:12361715</ref> <ref>PMID:18768789</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/3dze_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dze ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[ATP synthase|ATP synthase]]
+
*[[ATPase 3D structures|ATPase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:018768789</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Belogrudov, G I.]]
+
[[Category: Large Structures]]
-
[[Category: Lee, J K.]]
+
[[Category: Belogrudov GI]]
-
[[Category: Stroud, R M.]]
+
[[Category: Lee JK]]
-
[[Category: Electron transport]]
+
[[Category: Stroud RM]]
-
[[Category: Hydrogen ion transport]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Leucine-rich repeat]]
+
-
[[Category: Membrane]]
+
-
[[Category: Mitochondrion]]
+
-
[[Category: Mitochondrion inner membrane]]
+
-
[[Category: Transit peptide]]
+
-
[[Category: Transport]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of bovine coupling Factor B bound with cadmium

PDB ID 3dze

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools