This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1llp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 10 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1llp.png|left|200px]]
 
-
{{STRUCTURE_1llp| PDB=1llp | SCENE= }}
+
==LIGNIN PEROXIDASE (ISOZYME H2) PI 4.15==
-
 
+
<StructureSection load='1llp' size='340' side='right'caption='[[1llp]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===LIGNIN PEROXIDASE (ISOZYME H2) PI 4.15===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1llp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LLP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LLP FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10024453}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1llp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1llp OCA], [https://pdbe.org/1llp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1llp RCSB], [https://www.ebi.ac.uk/pdbsum/1llp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1llp ProSAT]</span></td></tr>
-
[[1llp]] is a 1 chain structure of [[Lignin peroxidase]] with sequence from [http://en.wikipedia.org/wiki/Phanerochaete_chrysosporium Phanerochaete chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LLP OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LIG2_PHACH LIG2_PHACH] Depolymerization of lignin. Catalyzes the C(alpha)-C(beta) cleavage of the propyl side chains of lignin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ll/1llp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1llp ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Lignin peroxidase|Lignin peroxidase]]
*[[Lignin peroxidase|Lignin peroxidase]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:010024453</ref><ref group="xtra">PMID:009636023</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Phanerochaete chrysosporium]]
+
[[Category: Phanerodontia chrysosporium]]
-
[[Category: Choinowski, T H.]]
+
[[Category: Choinowski TH]]
-
[[Category: Glumoff, T.]]
+
[[Category: Glumoff T]]
-
[[Category: Piontek, K.]]
+
[[Category: Piontek K]]
-
[[Category: Glyco protein]]
+
-
[[Category: Heme protein]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

LIGNIN PEROXIDASE (ISOZYME H2) PI 4.15

PDB ID 1llp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools