This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3up4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:04, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3up4.png|left|200px]]
 
-
{{STRUCTURE_3up4| PDB=3up4 | SCENE= }}
+
==Crystal Structure of OTEMO complex with FAD and NADP (form 3)==
-
 
+
<StructureSection load='3up4' size='340' side='right'caption='[[3up4]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===Crystal Structure of OTEMO complex with FAD and NADP (form 3)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3up4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UP4 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22267661}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.804&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3up4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3up4 OCA], [https://pdbe.org/3up4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3up4 RCSB], [https://www.ebi.ac.uk/pdbsum/3up4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3up4 ProSAT]</span></td></tr>
-
[[3up4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UP4 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/OTEMO_PSEPU OTEMO_PSEPU] Involved in the degradation of (+)-camphor. Catalyzes the lactonization of 2-oxo-delta(3)-4,5, 5-trimethylcyclopentenylacetyl-CoA (OT-CoA), a key intermediate in the metabolism of camphor. 2-Oxocyclopentyl ethyl acetate is also a good substrate, as is 2-oxocyclohexyl ethyl acetate and methyl-substituted cyclohexanones, but free acid is a poor substrate.<ref>PMID:22267661</ref> <ref>PMID:22286514</ref> <ref>PMID:6848481</ref>
-
<ref group="xtra">PMID:022267661</ref><references group="xtra"/>
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Cygler, M.]]
+
[[Category: Cygler M]]
-
[[Category: Lau, P.]]
+
[[Category: Lau P]]
-
[[Category: Matte, A.]]
+
[[Category: Matte A]]
-
[[Category: Shi, R.]]
+
[[Category: Shi R]]
-
[[Category: Baeyer-villiger monooxygenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal Structure of OTEMO complex with FAD and NADP (form 3)

PDB ID 3up4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools