2bzl
From Proteopedia
(Difference between revisions)
(8 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | [[Image:2bzl.png|left|200px]] | ||
- | + | ==CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE N14 AT 1. 65 A RESOLUTION== | |
- | + | <StructureSection load='2bzl' size='340' side='right'caption='[[2bzl]], [[Resolution|resolution]] 1.65Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2bzl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BZL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BZL FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> | |
- | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | [[2bzl]] is a 1 chain structure | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bzl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bzl OCA], [https://pdbe.org/2bzl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bzl RCSB], [https://www.ebi.ac.uk/pdbsum/2bzl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bzl ProSAT]</span></td></tr> |
+ | </table> | ||
+ | == Disease == | ||
+ | [https://www.uniprot.org/uniprot/PTN14_HUMAN PTN14_HUMAN] Lymphedema-posterior choanal atresia syndrome. The disease is caused by mutations affecting the gene represented in this entry. A homozygous deletion in PTPN14 predicted to result in frameshift and premature truncation, has been shown to be the cause of choanal atresia and lymphedema in one family. Influence clinical severity of hereditary haemorragic telagiectasia (HHT).<ref>PMID:22233626</ref> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PTN14_HUMAN PTN14_HUMAN] Protein tyrosine phosphatase which may play a role in the regulation of lymphangiogenesis, cell-cell adhesion, cell-matrix adhesion, cell migration, cell growth and also regulates TGF-beta gene expression, thereby modulating epithelial-mesenchymal transition. Mediates beta-catenin dephosphorylation at adhesion junctions. Acts as a negative regulator of the oncogenic property of YAP, a downstream target of the hippo pathway, in a cell density-dependent manner. May function as a tumor suppressor.<ref>PMID:10934049</ref> <ref>PMID:12808048</ref> <ref>PMID:17893246</ref> <ref>PMID:20826270</ref> <ref>PMID:22233626</ref> <ref>PMID:22525271</ref> <ref>PMID:22948661</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bz/2bzl_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bzl ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
- | *[[Tyrosine phosphatase|Tyrosine phosphatase]] | + | *[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]] |
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Arrowsmith | + | [[Category: Arrowsmith C]] |
- | [[Category: Barr | + | [[Category: Barr A]] |
- | [[Category: Burgess | + | [[Category: Burgess N]] |
- | [[Category: Das | + | [[Category: Das S]] |
- | [[Category: Debreczeni | + | [[Category: Debreczeni JE]] |
- | + | [[Category: Edwards A]] | |
- | [[Category: Edwards | + | [[Category: Eswaran J]] |
- | [[Category: Eswaran | + | [[Category: Fedorov O]] |
- | [[Category: Fedorov | + | [[Category: Gileadi O]] |
- | [[Category: Gileadi | + | [[Category: Knapp S]] |
- | [[Category: Knapp | + | [[Category: Longman E]] |
- | [[Category: Longman | + | [[Category: Sundstrom M]] |
- | [[Category: Sundstrom | + | [[Category: Weigelt J]] |
- | [[Category: Weigelt | + | [[Category: Von Delft F]] |
- | [[Category: | + | |
- | + | ||
- | + |
Current revision
CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE N14 AT 1. 65 A RESOLUTION
|
Categories: Homo sapiens | Large Structures | Arrowsmith C | Barr A | Burgess N | Das S | Debreczeni JE | Edwards A | Eswaran J | Fedorov O | Gileadi O | Knapp S | Longman E | Sundstrom M | Weigelt J | Von Delft F