1nbj

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[[Image:1nbj.png|left|200px]]
 
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{{STRUCTURE_1nbj| PDB=1nbj | SCENE= }}
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==High-resolution solution structure of cycloviolacin O1==
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<StructureSection load='1nbj' size='340' side='right'caption='[[1nbj]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1nbj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Viola_odorata Viola odorata]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NBJ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nbj OCA], [https://pdbe.org/1nbj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nbj RCSB], [https://www.ebi.ac.uk/pdbsum/1nbj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nbj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CYO1_VIOOD CYO1_VIOOD] Probably participates in a plant defense mechanism.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In recent years an increasing number of miniproteins containing an amide-cyclized backbone have been discovered. The cyclotide family is the largest group of such proteins and is characterized by a circular protein backbone and six conserved cysteine residues linked by disulfide bonds in a tight core of the molecule. These form a cystine knot in which an embedded ring formed by two of the disulfide bonds and the connecting backbone segment is threaded by a third disulfide bond. In the current study we have undertaken high resolution structural analysis of two prototypic cyclotides, kalata B1 and cycloviolacin O1, to define the role of the conserved residues in the sequence. We provide the first comprehensive analysis of the topological features in this unique family of proteins, namely rings (a circular backbone), twists (a cis-peptide bond in the Mobius cyclotides) and knots (a knotted arrangement of the disulfide bonds).
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===High-resolution solution structure of cycloviolacin O1===
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Twists, knots, and rings in proteins. Structural definition of the cyclotide framework.,Rosengren KJ, Daly NL, Plan MR, Waine C, Craik DJ J Biol Chem. 2003 Mar 7;278(10):8606-16. Epub 2002 Dec 12. PMID:12482868<ref>PMID:12482868</ref>
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{{ABSTRACT_PUBMED_12482868}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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==About this Structure==
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<div class="pdbe-citations 1nbj" style="background-color:#fffaf0;"></div>
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[[1nbj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Viola_odorata Viola odorata]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NBJ OCA].
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== References ==
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<references/>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:012482868</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Viola odorata]]
[[Category: Viola odorata]]
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[[Category: Craik, D J.]]
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[[Category: Craik DJ]]
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[[Category: Daly, N L.]]
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[[Category: Daly NL]]
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[[Category: Plan, M R.]]
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[[Category: Plan MR]]
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[[Category: Rosengren, K J.]]
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[[Category: Rosengren KJ]]
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[[Category: Waine, C.]]
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[[Category: Waine C]]
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[[Category: Cck]]
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[[Category: Cyclic backbone]]
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[[Category: Cyclotide]]
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[[Category: Cystine knot]]
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[[Category: Plant protein]]
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Current revision

High-resolution solution structure of cycloviolacin O1

PDB ID 1nbj

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