1tge
From Proteopedia
(Difference between revisions)
(9 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | [[Image:1tge.png|left|200px]] | ||
- | + | ==The structure of immature Dengue virus at 12.5 angstrom== | |
- | + | <SX load='1tge' size='340' side='right' viewer='molstar' caption='[[1tge]], [[Resolution|resolution]] 12.50Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1tge]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dengue_virus_2_Puerto_Rico/PR159-S1/1969 Dengue virus 2 Puerto Rico/PR159-S1/1969]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TGE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TGE FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.5Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tge OCA], [https://pdbe.org/1tge PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tge RCSB], [https://www.ebi.ac.uk/pdbsum/1tge PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tge ProSAT]</span></td></tr> | |
- | == | + | </table> |
- | [[1tge]] is a 3 chain structure with sequence from [ | + | == Function == |
- | + | [https://www.uniprot.org/uniprot/POLG_DEN2T POLG_DEN2T] Envelope protein E binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes (By similarity). Non-structural protein 1 is involved in virus replication and regulation of the innate immune response. Soluble and membrane-associated NS1 may activate human complement and induce host vascular leakage. This effect might explain the clinical manifestations of dengue hemorrhagic fever and dengue shock syndrome (By similarity). Non-structural protein 2A may be involved viral RNA replication and capsid assembly (Potential). Non-structural protein 2B is a required cofactor for the serine protease function of NS3 (By similarity). Serine protease NS3 displays three enzymatic activities: serine protease, NTPase and RNA helicase. NS3 serine protease, in association with NS2B, performs its autocleavage and cleaves the polyprotein at dibasic sites in the cytoplasm: C-prM, NS2A-NS2B, NS2B-NS3, NS3-NS4A, NS4A-2K and NS4B-NS5. NS3 RNA helicase binds RNA and unwinds dsRNA in the 3' to 5' direction (By similarity). | |
- | == | + | __TOC__ |
- | < | + | </SX> |
- | [[ | + | [[Category: Dengue virus 2 Puerto Rico/PR159-S1/1969]] |
- | + | [[Category: Large Structures]] | |
- | + | [[Category: Baker TS]] | |
- | [ | + | [[Category: Clements D]] |
- | [[Category: | + | [[Category: Kuhn RJ]] |
- | [[Category: | + | [[Category: Ogata S]] |
- | [[Category: | + | [[Category: Rossmann MG]] |
- | [[Category: | + | [[Category: Strauss JH]] |
- | [[Category: | + | [[Category: Zhang W]] |
- | [[Category: | + | [[Category: Zhang Y]] |
- | [[Category: | + | |
- | [[Category: | + | |
- | [[Category: | + | |
- | [[Category: | + |
Current revision
The structure of immature Dengue virus at 12.5 angstrom
|