1j5s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:36, 22 May 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1j5s.gif|left|200px]]<br /><applet load="1j5s" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1j5s, resolution 2.85&Aring;" />
 
-
'''Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution==
-
1J5S is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Active as [http://en.wikipedia.org/wiki/Glucuronate_isomerase Glucuronate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.12 5.3.1.12] Known structural/functional Sites: <scene name='pdbsite=SA:Active+Site+At+H30,+H32,+W366,+D397.+These+Residues+Coor+...'>SA</scene>, <scene name='pdbsite=SB:Active+Site+At+H30,+H32,+W366,+D397.+These+Residues+Coor+...'>SB</scene> and <scene name='pdbsite=SC:Active+Site+At+H30,+H32,+W366,+D397.+These+Residues+Coor+...'>SC</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J5S OCA].
+
<StructureSection load='1j5s' size='340' side='right'caption='[[1j5s]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1j5s]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J5S FirstGlance]. <br>
-
Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution., Schwarzenbacher R, Canaves JM, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MA, Miller MD, Morse A, Moy K, Ouyang J, Robb A, Rodrigues K, Selby TL, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA, Proteins. 2003 Oct 1;53(1):142-5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12945057 12945057]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
-
[[Category: Glucuronate isomerase]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j5s OCA], [https://pdbe.org/1j5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j5s RCSB], [https://www.ebi.ac.uk/pdbsum/1j5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j5s ProSAT], [https://www.topsan.org/Proteins/JCSG/1j5s TOPSAN]</span></td></tr>
-
[[Category: Single protein]]
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/UXAC_THEMA UXAC_THEMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j5/1j5s_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j5s ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
 
-
[[Category: jcsg]]
 
-
[[Category: joint center for structural genomics]]
 
-
[[Category: protein structure initiative]]
 
-
[[Category: psi]]
 
-
[[Category: structural genomics]]
 
-
[[Category: tm0064]]
 
-
[[Category: uronate isomerase]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:19:18 2008''
 

Current revision

Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution

PDB ID 1j5s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1j5s"
Personal tools