1jf0
From Proteopedia
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| - | [[Image:1jf0.gif|left|200px]]<br /><applet load="1jf0" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1jf0, resolution 1.82Å" /> | ||
| - | '''The Crystal Structure of Obelin from Obelia geniculata at 1.82 A Resolution'''<br /> | ||
| - | == | + | ==The Crystal Structure of Obelin from Obelia geniculata at 1.82 A Resolution== |
| - | + | <StructureSection load='1jf0' size='340' side='right'caption='[[1jf0]], [[Resolution|resolution]] 1.82Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1jf0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Obelia_longissima Obelia longissima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JF0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JF0 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CZH:C2-HYDROPEROXY-COELENTERAZINE'>CZH</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jf0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jf0 OCA], [https://pdbe.org/1jf0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jf0 RCSB], [https://www.ebi.ac.uk/pdbsum/1jf0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jf0 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/OBL_OBELO OBL_OBELO] Ca(2+)-dependent bioluminescence photoprotein. Displays an emission peak at 470 nm (blue light). Trace amounts of calcium ion trigger the intramolecular oxidation of the chromophore, coelenterazine into coelenteramide and CO(2) with the concomitant emission of light. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jf/1jf0_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jf0 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Obelia longissima]] | [[Category: Obelia longissima]] | ||
| - | + | [[Category: Deng L]] | |
| - | [[Category: Deng | + | [[Category: Lee J]] |
| - | [[Category: Lee | + | [[Category: Liu Z-J]] |
| - | [[Category: Liu | + | [[Category: Markova S]] |
| - | [[Category: Markova | + | [[Category: Rose J]] |
| - | [[Category: Rose | + | [[Category: Vysotski E]] |
| - | [[Category: Vysotski | + | [[Category: Wang B-C]] |
| - | [[Category: Wang | + | |
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Current revision
The Crystal Structure of Obelin from Obelia geniculata at 1.82 A Resolution
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Categories: Large Structures | Obelia longissima | Deng L | Lee J | Liu Z-J | Markova S | Rose J | Vysotski E | Wang B-C
