This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4e0d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:49, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4e0d.png|left|200px]]
 
-
{{STRUCTURE_4e0d| PDB=4e0d | SCENE= }}
+
==Binary complex of Bacillus DNA Polymerase I Large Fragment E658A and duplex DNA==
 +
<StructureSection load='4e0d' size='340' side='right'caption='[[4e0d]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4e0d]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E0D FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCP:2-DEOXYCYTIDINE-5-TRIPHOSPHATE'>DCP</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e0d OCA], [https://pdbe.org/4e0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e0d RCSB], [https://www.ebi.ac.uk/pdbsum/4e0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e0d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5KWC1_GEOKA Q5KWC1_GEOKA]
-
===Binary complex of Bacillus DNA Polymerase I Large Fragment E658A and duplex DNA===
+
==See Also==
-
 
+
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
-
{{ABSTRACT_PUBMED_22648417}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Geobacillus kaustophilus HTA426]]
-
[[4e0d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E0D OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Synthetic construct]]
-
==Reference==
+
[[Category: Beese LS]]
-
<ref group="xtra">PMID:022648417</ref><ref group="xtra">PMID:022006298</ref><references group="xtra"/>
+
[[Category: Wang W]]
-
[[Category: DNA-directed DNA polymerase]]
+
-
[[Category: Geobacillus kaustophilus]]
+
-
[[Category: Beese, L S.]]
+
-
[[Category: Wang, W.]]
+
-
[[Category: Dna polymerase i]]
+
-
[[Category: Protein-dna complex]]
+
-
[[Category: Transferase-dna complex]]
+

Current revision

Binary complex of Bacillus DNA Polymerase I Large Fragment E658A and duplex DNA

PDB ID 4e0d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools