4gt7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (02:57, 21 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4gt7.jpg|left|200px]]
 
-
{{STRUCTURE_4gt7| PDB=4gt7 | SCENE= }}
+
==An engineered disulfide bond reversibly traps the IgE-Fc3-4 in a closed, non-receptor binding conformation==
 +
<StructureSection load='4gt7' size='340' side='right'caption='[[4gt7]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4gt7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GT7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GT7 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gt7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gt7 OCA], [https://pdbe.org/4gt7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gt7 RCSB], [https://www.ebi.ac.uk/pdbsum/4gt7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gt7 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IGHE_HUMAN IGHE_HUMAN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
IgE antibodies interact with the high affinity IgE Fc receptor, FcepsilonRI, and activate inflammatory pathways associated with the allergic response. The IgE-Fc region, comprising the C-terminal domains of the IgE heavy chain, binds FcepsilonRI and can adopt different conformations ranging from a closed form incompatible with receptor binding to an open, receptor-bound state. A number of intermediate states are also observed in different IgE-Fc crystal forms. To further explore this apparent IgE-Fc conformational flexibility and to potentially trap a closed, inactive state, we generated a series of disulfide bond mutants. Here we describe the structure and biochemical properties of an IgE-Fc mutant that is trapped in the closed, non-receptor binding state via an engineered disulfide at residue 335 (Cys-335). Reduction of the disulfide at Cys-335 restores the ability of IgE-Fc to bind to its high affinity receptor, FcepsilonRIalpha. The structure of the Cys-335 mutant shows that its conformation is within the range of previously observed, closed form IgE-Fc structures and that it retains the hydrophobic pocket found in the hinge region of the closed conformation. Locking the IgE-Fc into the closed state with the Cys-335 mutation does not affect binding of two other IgE-Fc ligands, omalizumab and DARPin E2_79, demonstrating selective blocking of the high affinity receptor binding.
-
===An engineered disulfide bond reversibly traps the IgE-Fc3-4 in a closed, non-receptor binding conformation===
+
An engineered disulfide bond reversibly traps the IgE-Fc3-4 in a closed, nonreceptor binding conformation.,Wurzburg BA, Kim B, Tarchevskaya SS, Eggel A, Vogel M, Jardetzky TS J Biol Chem. 2012 Oct 19;287(43):36251-7. doi: 10.1074/jbc.M112.407502. Epub 2012, Sep 4. PMID:22948141<ref>PMID:22948141</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
==About this Structure==
+
</div>
-
[[4gt7]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GT7 OCA].
+
<div class="pdbe-citations 4gt7" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Jardetzky, T S.]]
+
[[Category: Large Structures]]
-
[[Category: Kim, B K.]]
+
[[Category: Jardetzky TS]]
-
[[Category: Wurzburg, B A.]]
+
[[Category: Kim BK]]
-
[[Category: Antibody]]
+
[[Category: Wurzburg BA]]
-
[[Category: Fc fragment]]
+
-
[[Category: Fc receptor]]
+
-
[[Category: Ige]]
+
-
[[Category: Immune system]]
+
-
[[Category: Immunoglobulin]]
+

Current revision

An engineered disulfide bond reversibly traps the IgE-Fc3-4 in a closed, non-receptor binding conformation

PDB ID 4gt7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools