4b2q

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[[Image:4b2q.png|left|200px]]
 
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{{STRUCTURE_4b2q| PDB=4b2q | SCENE= }}
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==Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average==
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<SX load='4b2q' size='340' side='right' viewer='molstar' caption='[[4b2q]], [[Resolution|resolution]] 37.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4b2q]] is a 42 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B2Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4B2Q FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 37&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4b2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b2q OCA], [https://pdbe.org/4b2q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4b2q RCSB], [https://www.ebi.ac.uk/pdbsum/4b2q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4b2q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ATPA_YEAST ATPA_YEAST] Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. Subunit alpha does not bear the catalytic high-affinity ATP-binding sites (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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We used electron cryotomography of mitochondrial membranes from wild-type and mutant Saccharomyces cerevisiae to investigate the structure and organization of ATP synthase dimers in situ. Subtomogram averaging of the dimers to 3.7 nm resolution revealed a V-shaped structure of twofold symmetry, with an angle of 86 degrees between monomers. The central and peripheral stalks are well resolved. The monomers interact within the membrane at the base of the peripheral stalks. In wild-type mitochondria ATP synthase dimers are found in rows along the highly curved cristae ridges, and appear to be crucial for membrane morphology. Strains deficient in the dimer-specific subunits e and g or the first transmembrane helix of subunit 4 lack both dimers and lamellar cristae. Instead, cristae are either absent or balloon-shaped, with ATP synthase monomers distributed randomly in the membrane. Computer simulations indicate that isolated dimers induce a plastic deformation in the lipid bilayer, which is partially relieved by their side-by-side association. We propose that the assembly of ATP synthase dimer rows is driven by the reduction in the membrane elastic energy, rather than by direct protein contacts, and that the dimer rows enable the formation of highly curved ridges in mitochondrial cristae.
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===Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average===
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Structure of the yeast F1Fo-ATP synthase dimer and its role in shaping the mitochondrial cristae.,Davies KM, Anselmi C, Wittig I, Faraldo-Gomez JD, Kuhlbrandt W Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13602-7. Epub 2012 Aug 3. PMID:22864911<ref>PMID:22864911</ref>
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{{ABSTRACT_PUBMED_22864911}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4b2q" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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[[4b2q]] is a 46 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B2Q OCA].
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*[[ATPase 3D structures|ATPase 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:022864911</ref><references group="xtra"/>
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__TOC__
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</SX>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
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[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Davies, K M.]]
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[[Category: Davies KM]]
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[[Category: Kuehlbrandt, W.]]
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[[Category: Kuehlbrandt W]]
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[[Category: Hydrolase]]
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[[Category: Subtomogram average]]
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Current revision

Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average

4b2q, resolution 37.00Å

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