This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gxh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:48, 3 April 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4gxh.jpg|left|200px]]
 
-
{{STRUCTURE_4gxh| PDB=4gxh | SCENE= }}
+
==Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004==
-
 
+
<StructureSection load='4gxh' size='340' side='right'caption='[[4gxh]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
===Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4gxh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xenorhabdus_bovienii_SS-2004 Xenorhabdus bovienii SS-2004]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GXH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GXH FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[4gxh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenorhabdus_bovienii Xenorhabdus bovienii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GXH OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gxh OCA], [https://pdbe.org/4gxh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gxh RCSB], [https://www.ebi.ac.uk/pdbsum/4gxh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gxh ProSAT]</span></td></tr>
-
[[Category: Pyroglutamyl-peptidase I]]
+
</table>
-
[[Category: Xenorhabdus bovienii]]
+
== Function ==
-
[[Category: Almo, S C.]]
+
[https://www.uniprot.org/uniprot/D3V0W1_XENBS D3V0W1_XENBS] Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).[HAMAP-Rule:MF_00417][SAAS:SAAS000816_004_005679]
-
[[Category: Ghosh, A.]]
+
__TOC__
-
[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
+
</StructureSection>
-
[[Category: Hydrolase]]
+
[[Category: Large Structures]]
-
[[Category: New york structural genomics research consortium]]
+
[[Category: Xenorhabdus bovienii SS-2004]]
-
[[Category: Nysgrc]]
+
[[Category: Almo SC]]
-
[[Category: Psi-biology]]
+
[[Category: Ghosh A]]
-
[[Category: Structural genomic]]
+

Current revision

Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004

PDB ID 4gxh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools