4esj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:05, 1 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4esj.png|left|200px]]
 
-
{{STRUCTURE_4esj| PDB=4esj | SCENE= }}
+
==RESTRICTION ENDONUCLEASE DpnI IN COMPLEX WITH TARGET DNA==
-
 
+
<StructureSection load='4esj' size='340' side='right'caption='[[4esj]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
===RESTRICTION ENDONUCLEASE DpnI IN COMPLEX WITH TARGET DNA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4esj]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ESJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ESJ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22610857}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6MA:N6-METHYL-DEOXY-ADENOSINE-5-MONOPHOSPHATE'>6MA</scene>, <scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4esj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4esj OCA], [https://pdbe.org/4esj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4esj RCSB], [https://www.ebi.ac.uk/pdbsum/4esj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4esj ProSAT]</span></td></tr>
-
[[4esj]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ESJ OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/T2D1_STRR6 T2D1_STRR6] Recognizes the double-stranded and methylated sequence G(Me)ATC and cleaves after A-2.
-
<ref group="xtra">PMID:022610857</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Streptococcus pneumoniae tigr4]]
+
</StructureSection>
-
[[Category: Type II site-specific deoxyribonuclease]]
+
[[Category: Large Structures]]
-
[[Category: Bochtler, M.]]
+
[[Category: Streptococcus pneumoniae TIGR4]]
-
[[Category: Bujnicki, J M.]]
+
[[Category: Synthetic construct]]
-
[[Category: Czapinska, H.]]
+
[[Category: Bochtler M]]
-
[[Category: Siwek, W.]]
+
[[Category: Bujnicki JM]]
-
[[Category: Skowronek, K.]]
+
[[Category: Czapinska H]]
-
[[Category: Dna binding]]
+
[[Category: Siwek W]]
-
[[Category: Dpni]]
+
[[Category: Skowronek K]]
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Methylation dependent]]
+
-
[[Category: N6-methyladenine]]
+
-
[[Category: Restriction endonuclease]]
+
-
[[Category: Restriction endonuclease-dna complex]]
+
-
[[Category: Restriction enzyme]]
+
-
[[Category: Type iie]]
+
-
[[Category: Type iim]]
+
-
[[Category: Winged helix domain]]
+

Current revision

RESTRICTION ENDONUCLEASE DpnI IN COMPLEX WITH TARGET DNA

PDB ID 4esj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools