This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jyq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:56, 3 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jyq.png|left|200px]]
 
-
{{STRUCTURE_1jyq| PDB=1jyq | SCENE= }}
+
==Xray Structure of Grb2 SH2 Domain Complexed with a Highly Affine Phospho Peptide==
-
 
+
<StructureSection load='1jyq' size='340' side='right'caption='[[1jyq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Xray Structure of Grb2 SH2 Domain Complexed with a Highly Affine Phospho Peptide===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jyq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JYQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JYQ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11827484}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAZ:FORMIC+ACID+3-AMINO-BENZYL+ESTER'>MAZ</scene>, <scene name='pdbligand=PTM:ALPHA-METHYL-O-PHOSPHOTYROSINE'>PTM</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jyq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jyq OCA], [https://pdbe.org/1jyq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jyq RCSB], [https://www.ebi.ac.uk/pdbsum/1jyq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jyq ProSAT]</span></td></tr>
-
[[1jyq]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JYQ OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GRB2_HUMAN GRB2_HUMAN] Adapter protein that provides a critical link between cell surface growth factor receptors and the Ras signaling pathway.<ref>PMID:1322798</ref> <ref>PMID:8178156</ref> <ref>PMID:19815557</ref> Isoform 2 does not bind to phosphorylated epidermal growth factor receptor (EGFR) but inhibits EGF-induced transactivation of a RAS-responsive element. Isoform 2 acts as a dominant negative protein over GRB2 and by suppressing proliferative signals, may trigger active programmed cell death.<ref>PMID:1322798</ref> <ref>PMID:8178156</ref> <ref>PMID:19815557</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/1jyq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jyq ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Growth factor receptor-bound protein 2|Growth factor receptor-bound protein 2]]
+
*[[Growth factor receptor-bound proteins 3D structures|Growth factor receptor-bound proteins 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:011827484</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Broutin, I.]]
+
[[Category: Large Structures]]
-
[[Category: Charbonnier, F.]]
+
[[Category: Broutin I]]
-
[[Category: Ducruix, A.]]
+
[[Category: Charbonnier F]]
-
[[Category: Garbay, C.]]
+
[[Category: Ducruix A]]
-
[[Category: Latreille, M T.]]
+
[[Category: Garbay C]]
-
[[Category: Liu, W Q.]]
+
[[Category: Latreille M-T]]
-
[[Category: Nioche, P.]]
+
[[Category: Liu W-Q]]
-
[[Category: Roques, B.]]
+
[[Category: Nioche P]]
-
[[Category: Vidal, M.]]
+
[[Category: Roques B]]
-
[[Category: Receptor binding]]
+
[[Category: Vidal M]]
-
[[Category: Regulatory]]
+
-
[[Category: Signaling protein-peptide inhibitor complex]]
+
-
[[Category: Signaling protein-signaling protein inhibitor]]
+

Current revision

Xray Structure of Grb2 SH2 Domain Complexed with a Highly Affine Phospho Peptide

PDB ID 1jyq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools