This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cug

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:45, 2 February 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3cug.png|left|200px]]
 
-
{{STRUCTURE_3cug| PDB=3cug | SCENE= }}
+
==Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine==
-
 
+
<StructureSection load='3cug' size='340' side='right'caption='[[3cug]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
-
===Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3cug]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_fimi"_mcbeth_and_scales_1913 "bacterium fimi" mcbeth and scales 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CUG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CUG FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G3I:(3R,4R,5R)-3-HYDROXY-5-(HYDROXYMETHYL)PIPERIDIN-4-YL+BETA-D-GLUCOPYRANOSYL-(1- 4)-BETA-D-GLUCOPYRANOSYL-(1- 4)-BETA-D-GLUCOPYRANOSIDE'>G3I</scene></td></tr>
-
==About this Structure==
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1fh7|1fh7]], [[1fh8|1fh8]], [[1fh9|1fh9]], [[1fhd|1fhd]], [[3cuf|3cuf]], [[3cuh|3cuh]], [[3cui|3cui]], [[3cuj|3cuj]]</div></td></tr>
-
[[3cug]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellulomonas_fimi Cellulomonas fimi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CUG OCA].
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cex ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1708 "Bacterium fimi" McBeth and Scales 1913])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cellulose_1,4-beta-cellobiosidase_(non-reducing_end) Cellulose 1,4-beta-cellobiosidase (non-reducing end)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.91 3.2.1.91] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cug FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cug OCA], [https://pdbe.org/3cug PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cug RCSB], [https://www.ebi.ac.uk/pdbsum/3cug PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cug ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cu/3cug_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cug ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
[[Category: Cellulomonas fimi]]
+
__TOC__
-
[[Category: Cellulose 1,4-beta-cellobiosidase]]
+
</StructureSection>
-
[[Category: Kuntz, D A.]]
+
[[Category: Bacterium fimi mcbeth and scales 1913]]
-
[[Category: Rose, D R.]]
+
[[Category: Large Structures]]
-
[[Category: Saul, M.]]
+
[[Category: Kuntz, D A]]
 +
[[Category: Rose, D R]]
 +
[[Category: Saul, M]]
[[Category: Cellulose degradation]]
[[Category: Cellulose degradation]]
[[Category: Cex]]
[[Category: Cex]]

Current revision

Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine

PDB ID 3cug

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools