3lpy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3lpy.png|left|200px]]
 
-
{{STRUCTURE_3lpy| PDB=3lpy | SCENE= }}
+
==Crystal structure of the RRM domain of CyP33==
-
 
+
<StructureSection load='3lpy' size='340' side='right'caption='[[3lpy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of the RRM domain of CyP33===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3lpy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LPY FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_20541251}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lpy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpy OCA], [https://pdbe.org/3lpy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lpy RCSB], [https://www.ebi.ac.uk/pdbsum/3lpy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpy ProSAT]</span></td></tr>
-
[[3lpy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPY OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PPIE_HUMAN PPIE_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Combines RNA-binding and PPIase activities. May be involved in muscle- and brain-specific processes. May be involved in pre-mRNA splicing.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lp/3lpy_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lpy ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cyclophilin|Cyclophilin]]
+
*[[Cyclophilin 3D structures|Cyclophilin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:020541251</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Peptidylprolyl isomerase]]
+
[[Category: Large Structures]]
-
[[Category: Patel, D J.]]
+
[[Category: Patel DJ]]
-
[[Category: Wang, Z.]]
+
[[Category: Wang Z]]
-
[[Category: Cyp33]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Mll1 binding]]
+
-
[[Category: Mrna processing]]
+
-
[[Category: Mrna splicing]]
+
-
[[Category: Nucleus]]
+
-
[[Category: Rna-binding]]
+
-
[[Category: Rotamase]]
+
-
[[Category: Rrm]]
+
-
[[Category: Spliceosome]]
+

Current revision

Crystal structure of the RRM domain of CyP33

PDB ID 3lpy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools