3qxj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:02, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3qxj.png|left|200px]]
 
-
{{STRUCTURE_3qxj| PDB=3qxj | SCENE= }}
+
==Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GTP==
-
 
+
<StructureSection load='3qxj' size='340' side='right'caption='[[3qxj]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
-
===Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GTP===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3qxj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QXJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QXJ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22284390}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qxj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qxj OCA], [https://pdbe.org/3qxj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qxj RCSB], [https://www.ebi.ac.uk/pdbsum/3qxj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qxj ProSAT]</span></td></tr>
-
[[3qxj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QXJ OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BIOD_HELPY BIOD_HELPY] Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (By similarity).[HAMAP-Rule:MF_00336]
==See Also==
==See Also==
-
*[[Dethiobiotin synthetase|Dethiobiotin synthetase]]
+
*[[Dethiobiotin synthetase 3D structures|Dethiobiotin synthetase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022284390</ref><references group="xtra"/>
+
[[Category: Helicobacter pylori 26695]]
-
[[Category: Dethiobiotin synthase]]
+
[[Category: Large Structures]]
-
[[Category: Helicobacter pylori]]
+
[[Category: Chruszcz M]]
-
[[Category: Chruszcz, M.]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Klimecka MM]]
-
[[Category: Klimecka, M M.]]
+
[[Category: Minor W]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Murzyn K]]
-
[[Category: Minor, W.]]
+
[[Category: Porebski PJ]]
-
[[Category: Murzyn, K.]]
+
-
[[Category: Porebski, P J.]]
+
-
[[Category: Adp binding]]
+
-
[[Category: Dethiobiotin synthetase]]
+
-
[[Category: Dtb]]
+
-
[[Category: Ligase]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GTP

PDB ID 3qxj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3qxj"
Personal tools