This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xxs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:19, 3 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xxs.png|left|200px]]
 
-
{{STRUCTURE_1xxs| PDB=1xxs | SCENE= }}
+
==Structural insights for fatty acid binding in a Lys49 phospholipase A2: crystal structure of myotoxin II from Bothrops moojeni complexed with stearic acid==
-
 
+
<StructureSection load='1xxs' size='340' side='right'caption='[[1xxs]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Structural insights for fatty acid binding in a Lys49 phospholipase A2: crystal structure of myotoxin II from Bothrops moojeni complexed with stearic acid===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1xxs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bothrops_moojeni Bothrops moojeni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XXS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XXS FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15760708}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xxs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xxs OCA], [https://pdbe.org/1xxs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xxs RCSB], [https://www.ebi.ac.uk/pdbsum/1xxs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xxs ProSAT]</span></td></tr>
-
[[1xxs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bothrops_moojeni Bothrops moojeni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XXS OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PA2H2_BOTMO PA2H2_BOTMO] Snake venom phospholipase A2 homolog that lack enzymatic activity. Displays myotoxin and edema-inducing activities.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xxs_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xxs ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Phospholipase A2|Phospholipase A2]]
+
*[[Phospholipase A2 3D structures|Phospholipase A2 3D structures]]
-
 
+
*[[Phospholipase A2 homolog|Phospholipase A2 homolog]]
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:015760708</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Bothrops moojeni]]
[[Category: Bothrops moojeni]]
-
[[Category: Arni, R K.]]
+
[[Category: Large Structures]]
-
[[Category: Fontes, M R.]]
+
[[Category: Arni RK]]
-
[[Category: Soares, A M.]]
+
[[Category: Fontes MR]]
-
[[Category: Ward, R J.]]
+
[[Category: Soares AM]]
-
[[Category: Watanabe, L.]]
+
[[Category: Ward RJ]]
-
[[Category: Dimer interface]]
+
[[Category: Watanabe L]]
-
[[Category: Fatty acid binding]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Phospholipase a2]]
+
-
[[Category: Stearic acid]]
+

Current revision

Structural insights for fatty acid binding in a Lys49 phospholipase A2: crystal structure of myotoxin II from Bothrops moojeni complexed with stearic acid

PDB ID 1xxs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools