This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1d1a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:47, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1d1a.png|left|200px]]
 
-
{{STRUCTURE_1d1a| PDB=1d1a | SCENE= }}
+
==DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH O,P-DINITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.==
-
 
+
<StructureSection load='1d1a' size='340' side='right'caption='[[1d1a]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH O,P-DINITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1d1a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D1A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D1A FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10617631}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAE:O,P-DINITROPHENYL+AMINOETHYLDIPHOSPHATE-BERYLLIUM+TRIFLUORIDE'>DAE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d1a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d1a OCA], [https://pdbe.org/1d1a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d1a RCSB], [https://www.ebi.ac.uk/pdbsum/1d1a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d1a ProSAT]</span></td></tr>
-
[[1d1a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D1A OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MYS2_DICDI MYS2_DICDI] Myosin is a protein that binds to actin and has ATPase activity that is activated by actin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/1d1a_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d1a ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Myosin|Myosin]]
+
*[[Myosin 3D Structures|Myosin 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:010617631</ref><references group="xtra"/>
+
[[Category: Dictyostelium discoideum]]
[[Category: Dictyostelium discoideum]]
-
[[Category: Bauer, C B.]]
+
[[Category: Large Structures]]
-
[[Category: Gulick, A M.]]
+
[[Category: Bauer CB]]
-
[[Category: Pate, E.]]
+
[[Category: Gulick AM]]
-
[[Category: Rayment, I.]]
+
[[Category: Pate E]]
-
[[Category: Thoden, J B.]]
+
[[Category: Rayment I]]
-
[[Category: Yount, R G.]]
+
[[Category: Thoden JB]]
-
[[Category: Actin-binding]]
+
[[Category: Yount RG]]
-
[[Category: Contractile protein]]
+
-
[[Category: Motility]]
+
-
[[Category: Motor domain]]
+
-
[[Category: Myosin]]
+
-
[[Category: Nanolog]]
+

Current revision

DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH O,P-DINITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE.

PDB ID 1d1a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools