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1ji1
From Proteopedia
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| - | [[Image:1ji1.png|left|200px]] | ||
| - | + | ==Crystal Structure Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase 1== | |
| - | + | <StructureSection load='1ji1' size='340' side='right'caption='[[1ji1]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1ji1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoactinomyces_vulgaris Thermoactinomyces vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JI1 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ji1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ji1 OCA], [https://pdbe.org/1ji1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ji1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ji1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ji1 ProSAT]</span></td></tr> |
| - | [[1ji1]] is a 2 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/NEPU1_THEVU NEPU1_THEVU] Endohydrolysis of 1,4-alpha-glucosidic linkages in pullulan to form panose. Also hydrolyzes cyclodextrins. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/1ji1_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ji1 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Amylase 3D structures|Amylase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| - | [[Category: | + | |
[[Category: Thermoactinomyces vulgaris]] | [[Category: Thermoactinomyces vulgaris]] | ||
| - | [[Category: Abe | + | [[Category: Abe A]] |
| - | [[Category: Kaji | + | [[Category: Kaji A]] |
| - | [[Category: Kamitori | + | [[Category: Kamitori S]] |
| - | [[Category: Ohtaki | + | [[Category: Ohtaki A]] |
| - | [[Category: Sakano | + | [[Category: Sakano Y]] |
| - | [[Category: Tonozuka | + | [[Category: Tonozuka T]] |
| - | + | ||
| - | + | ||
Current revision
Crystal Structure Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase 1
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