1ykd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:58, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ykd.png|left|200px]]
 
-
{{STRUCTURE_1ykd| PDB=1ykd | SCENE= }}
+
==Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization==
-
 
+
<StructureSection load='1ykd' size='340' side='right'caption='[[1ykd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1ykd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_sp. Anabaena sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YKD FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15708973}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ykd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ykd OCA], [https://pdbe.org/1ykd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ykd RCSB], [https://www.ebi.ac.uk/pdbsum/1ykd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ykd ProSAT]</span></td></tr>
-
[[1ykd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp. Anabaena sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKD OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/P94182_9NOST P94182_9NOST]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yk/1ykd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ykd ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Adenylyl cyclase|Adenylyl cyclase]]
+
*[[3D Adenylyl cyclase 3D structures|3D Adenylyl cyclase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015708973</ref><references group="xtra"/>
+
[[Category: Anabaena sp]]
-
[[Category: Adenylate cyclase]]
+
[[Category: Large Structures]]
-
[[Category: Anabaena sp.]]
+
[[Category: Beavo JA]]
-
[[Category: Beavo, J A.]]
+
[[Category: Bruder S]]
-
[[Category: Bruder, S.]]
+
[[Category: Linder JU]]
-
[[Category: Linder, J U.]]
+
[[Category: Martinez SE]]
-
[[Category: Martinez, S E.]]
+
[[Category: Schultz A]]
-
[[Category: Schultz, A.]]
+
[[Category: Schultz JE]]
-
[[Category: Schultz, J E.]]
+
[[Category: Zheng N]]
-
[[Category: Zheng, N.]]
+
-
[[Category: Bound cyclic amp ligand]]
+
-
[[Category: Gaf domain]]
+
-
[[Category: Lyase]]
+

Current revision

Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization

PDB ID 1ykd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools