This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1r4y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:09, 17 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1r4y.png|left|200px]]
 
-
{{STRUCTURE_1r4y| PDB=1r4y | SCENE= }}
+
==SOLUTION STRUCTURE OF THE DELETION MUTANT DELTA(7-22) OF THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN==
-
 
+
<StructureSection load='1r4y' size='340' side='right'caption='[[1r4y]]' scene=''>
-
===SOLUTION STRUCTURE OF THE DELETION MUTANT DELTA(7-22) OF THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1r4y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_giganteus Aspergillus giganteus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R4Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R4Y FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15044731}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r4y OCA], [https://pdbe.org/1r4y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r4y RCSB], [https://www.ebi.ac.uk/pdbsum/1r4y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r4y ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1r4y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_giganteus Aspergillus giganteus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R4Y OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/RNAS_ASPGI RNAS_ASPGI] Alpha-sarcin is specific for purines in both single- and double-stranded RNA. Its toxic action on eukaryotic cells is the result of cleavage of a single phosphodiester bond in the 60S subunit of ribosomes.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r4/1r4y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r4y ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ribonuclease|Ribonuclease]]
+
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015044731</ref><references group="xtra"/>
+
[[Category: Aspergillus giganteus]]
[[Category: Aspergillus giganteus]]
-
[[Category: RRNA endonuclease]]
+
[[Category: Large Structures]]
-
[[Category: Bruix, M.]]
+
[[Category: Bruix M]]
-
[[Category: Garcia-Mayoral, M F.]]
+
[[Category: Garcia-Mayoral MF]]
-
[[Category: Garcia-Ortega, L.]]
+
[[Category: Garcia-Ortega L]]
-
[[Category: Gavilanes, J G.]]
+
[[Category: Gavilanes JG]]
-
[[Category: Lillo, M P.]]
+
[[Category: Lillo MP]]
-
[[Category: Pozo, A Martinez Del.]]
+
[[Category: Martinez Del Pozo A]]
-
[[Category: Rico, M.]]
+
[[Category: Rico M]]
-
[[Category: Santoro, J.]]
+
[[Category: Santoro J]]
-
[[Category: Alpha-beta protein]]
+
-
[[Category: Hydrolase]]
+

Current revision

SOLUTION STRUCTURE OF THE DELETION MUTANT DELTA(7-22) OF THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN

PDB ID 1r4y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools