This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3li2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:20, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3li2.png|left|200px]]
 
-
{{STRUCTURE_3li2| PDB=3li2 | SCENE= }}
+
==Closed Conformation of HtsA Complexed with Staphyloferrin A==
-
 
+
<StructureSection load='3li2' size='340' side='right'caption='[[3li2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===Closed Conformation of HtsA Complexed with Staphyloferrin A===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3li2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_str._Newman Staphylococcus aureus subsp. aureus str. Newman]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LI2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LI2 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_20147287}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=SF8:(2R)-2-(2-{[(1R)-1-CARBOXY-4-{[(3S)-3,4-DICARBOXY-3-HYDROXYBUTANOYL]AMINO}BUTYL]AMINO}-2-OXOETHYL)-2-HYDROXYBUTANEDIOIC+ACID'>SF8</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3li2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3li2 OCA], [https://pdbe.org/3li2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3li2 RCSB], [https://www.ebi.ac.uk/pdbsum/3li2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3li2 ProSAT]</span></td></tr>
-
[[3li2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus Staphylococcus aureus subsp. aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LI2 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H3K9U6_STAAE A0A0H3K9U6_STAAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/li/3li2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3li2 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[ABC transporter|ABC transporter]]
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:020147287</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Staphylococcus aureus subsp. aureus]]
+
[[Category: Staphylococcus aureus subsp. aureus str. Newman]]
-
[[Category: Grigg, J C.]]
+
[[Category: Grigg JC]]
-
[[Category: Murphy, M E.P.]]
+
[[Category: Murphy MEP]]
-
[[Category: Binding protein]]
+
-
[[Category: Iron]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Receptor]]
+
-
[[Category: Siderophore]]
+
-
[[Category: Transport protein]]
+

Current revision

Closed Conformation of HtsA Complexed with Staphyloferrin A

PDB ID 3li2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools