2nx0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:22, 6 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2nx0.png|left|200px]]
 
-
{{STRUCTURE_2nx0| PDB=2nx0 | SCENE= }}
+
==Ferrous nitrosyl blackfin tuna myoglobin==
 +
<StructureSection load='2nx0' size='340' side='right'caption='[[2nx0]], [[Resolution|resolution]] 0.95&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2nx0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thunnus_atlanticus Thunnus atlanticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NX0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NX0 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.95&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO:NITRIC+OXIDE'>NO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nx0 OCA], [https://pdbe.org/2nx0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nx0 RCSB], [https://www.ebi.ac.uk/pdbsum/2nx0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nx0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MYG_THUOR MYG_THUOR] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/2nx0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nx0 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
S-nitrosylation is a post-translational protein modification that can alter the function of a variety of proteins. Despite the growing wealth of information that this modification may have important functional consequences, little is known about the structure of the moiety or its effect on protein tertiary structure. Here we report high-resolution x-ray crystal structures of S-nitrosylated and unmodified blackfin tuna myoglobin, which demonstrate that in vitro S-nitrosylation of this protein at the surface-exposed Cys-10 directly causes a reversible conformational change by "wedging" apart a helix and loop. Furthermore, we have demonstrated in solution and in a single crystal that reduction of the S-nitrosylated myoglobin with dithionite results in NO cleavage from the sulfur of Cys-10 and rebinding to the reduced heme iron, showing the reversibility of both the modification and the conformational changes. Finally, we report the 0.95-A structure of ferrous nitrosyl myoglobin, which provides an accurate structural view of the NO coordination geometry in the context of a globin heme pocket.
-
===Ferrous nitrosyl blackfin tuna myoglobin===
+
S-nitrosylation-induced conformational change in blackfin tuna myoglobin.,Schreiter ER, Rodriguez MM, Weichsel A, Montfort WR, Bonaventura J J Biol Chem. 2007 Jul 6;282(27):19773-80. Epub 2007 May 8. PMID:17488722<ref>PMID:17488722</ref>
-
{{ABSTRACT_PUBMED_17488722}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 2nx0" style="background-color:#fffaf0;"></div>
-
[[2nx0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thunnus_orientalis Thunnus orientalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NX0 OCA].
+
==See Also==
==See Also==
-
*[[Myoglobin|Myoglobin]]
+
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:017488722</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Thunnus orientalis]]
+
</StructureSection>
-
[[Category: Bonaventura, J.]]
+
[[Category: Large Structures]]
-
[[Category: Montfort, W R.]]
+
[[Category: Thunnus atlanticus]]
-
[[Category: Rodriguez, M M.]]
+
[[Category: Bonaventura J]]
-
[[Category: Schreiter, E R.]]
+
[[Category: Montfort WR]]
-
[[Category: Weichsel, A.]]
+
[[Category: Rodriguez MM]]
-
[[Category: Ferrous nitrosyl]]
+
[[Category: Schreiter ER]]
-
[[Category: Myoglobin]]
+
[[Category: Weichsel A]]
-
[[Category: Nitric oxide]]
+
-
[[Category: No]]
+
-
[[Category: Oxygen storage-transport complex]]
+

Current revision

Ferrous nitrosyl blackfin tuna myoglobin

PDB ID 2nx0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools