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1i6u
From Proteopedia
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| - | [[Image:1i6u.png|left|200px]] | ||
| - | + | ==RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII== | |
| - | + | <StructureSection load='1i6u' size='340' side='right'caption='[[1i6u]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1i6u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1I6U FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1i6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i6u OCA], [https://pdbe.org/1i6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1i6u RCSB], [https://www.ebi.ac.uk/pdbsum/1i6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1i6u ProSAT]</span></td></tr> |
| - | [[1i6u]] is a 4 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RS8_METJA RS8_METJA] One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/1i6u_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1i6u ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Ribosomal protein S8|Ribosomal protein S8]] | *[[Ribosomal protein S8|Ribosomal protein S8]] | ||
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Methanocaldococcus jannaschii]] | [[Category: Methanocaldococcus jannaschii]] | ||
| - | [[Category: Dumas | + | [[Category: Dumas P]] |
| - | [[Category: Ehresmann | + | [[Category: Ehresmann B]] |
| - | [[Category: Ehresmann | + | [[Category: Ehresmann C]] |
| - | [[Category: Fomenkova | + | [[Category: Fomenkova N]] |
| - | [[Category: Garber | + | [[Category: Garber M]] |
| - | [[Category: Lamzin | + | [[Category: Lamzin V]] |
| - | [[Category: Moine | + | [[Category: Moine H]] |
| - | [[Category: Nevskaya | + | [[Category: Nevskaya N]] |
| - | [[Category: Nikonov | + | [[Category: Nikonov O]] |
| - | [[Category: Nikonov | + | [[Category: Nikonov S]] |
| - | [[Category: Nikulin | + | [[Category: Nikulin A]] |
| - | [[Category: Piendl | + | [[Category: Piendl W]] |
| - | [[Category: Tishchenko | + | [[Category: Tishchenko S]] |
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Current revision
RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII
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Categories: Large Structures | Methanocaldococcus jannaschii | Dumas P | Ehresmann B | Ehresmann C | Fomenkova N | Garber M | Lamzin V | Moine H | Nevskaya N | Nikonov O | Nikonov S | Nikulin A | Piendl W | Tishchenko S
