2v3r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:04, 13 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2v3r.png|left|200px]]
 
-
{{STRUCTURE_2v3r| PDB=2v3r | SCENE= }}
+
==Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol==
-
 
+
<StructureSection load='2v3r' size='340' side='right'caption='[[2v3r]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===HYPOCREA JECORINA CEL7A IN COMPLEX WITH (S)-DIHYDROXY-PHENANTHRENOLOL===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2v3r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V3R FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>, <scene name='pdbligand=XX7:2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL'>XX7</scene></td></tr>
-
[[2v3r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3R OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v3r OCA], [https://pdbe.org/2v3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v3r RCSB], [https://www.ebi.ac.uk/pdbsum/2v3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v3r ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GUX1_HYPJE GUX1_HYPJE] The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v3r_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v3r ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cellobiohydrolase|Cellobiohydrolase]]
+
*[[Cellobiohydrolase 3D structures|Cellobiohydrolase 3D structures]]
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
[[Category: Cellulose 1,4-beta-cellobiosidase]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Trichoderma reesei]]
[[Category: Trichoderma reesei]]
-
[[Category: Berg, U.]]
+
[[Category: Berg U]]
-
[[Category: Fagerstrom, A.]]
+
[[Category: Fagerstrom A]]
-
[[Category: Sandgren, M.]]
+
[[Category: Sandgren M]]
-
[[Category: Stahlberg, J.]]
+
[[Category: Stahlberg J]]
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cellulose deagradation]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Chiral separation]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Polysaccharide degradation]]
+
-
[[Category: Pyrrolidone carboxylic acid]]
+

Current revision

Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol

PDB ID 2v3r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools