This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1taz
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1taz.png|left|200px]] | ||
| - | + | ==Catalytic Domain Of Human Phosphodiesterase 1B== | |
| - | + | <StructureSection load='1taz' size='340' side='right'caption='[[1taz]], [[Resolution|resolution]] 1.77Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1taz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TAZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TAZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.77Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1taz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1taz OCA], [https://pdbe.org/1taz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1taz RCSB], [https://www.ebi.ac.uk/pdbsum/1taz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1taz ProSAT]</span></td></tr> |
| - | [[1taz]] is a 1 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PDE1B_HUMAN PDE1B_HUMAN] Cyclic nucleotide phosphodiesterase with a dual-specificity for the second messengers cAMP and cGMP, which are key regulators of many important physiological processes. Has a preference for cGMP as a substrate. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ta/1taz_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1taz ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Phosphodiesterase|Phosphodiesterase]] | + | *[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
| - | + | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Artis | + | [[Category: Large Structures]] |
| - | [[Category: Bollag | + | [[Category: Artis DR]] |
| - | [[Category: Card | + | [[Category: Bollag G]] |
| - | [[Category: Fong | + | [[Category: Card GL]] |
| - | [[Category: Gillette | + | [[Category: Fong D]] |
| - | [[Category: Hsieh | + | [[Category: Gillette S]] |
| - | [[Category: Kim | + | [[Category: Hsieh D]] |
| - | [[Category: Milburn | + | [[Category: Kim S-H]] |
| - | [[Category: Neiman | + | [[Category: Milburn MV]] |
| - | [[Category: Schlessinger | + | [[Category: Neiman J]] |
| - | [[Category: Suzuki | + | [[Category: Schlessinger J]] |
| - | [[Category: West | + | [[Category: Suzuki Y]] |
| - | [[Category: Zhang | + | [[Category: West BL]] |
| - | [[Category: Zhang | + | [[Category: Zhang C]] |
| - | + | [[Category: Zhang KYJ]] | |
| - | + | ||
Current revision
Catalytic Domain Of Human Phosphodiesterase 1B
| |||||||||||
Categories: Homo sapiens | Large Structures | Artis DR | Bollag G | Card GL | Fong D | Gillette S | Hsieh D | Kim S-H | Milburn MV | Neiman J | Schlessinger J | Suzuki Y | West BL | Zhang C | Zhang KYJ

