This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1lcz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:32, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1lcz.png|left|200px]]
 
-
{{STRUCTURE_1lcz| PDB=1lcz | SCENE= }}
+
==streptavidin-BCAP complex==
-
 
+
<StructureSection load='1lcz' size='340' side='right'caption='[[1lcz]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
===streptavidin-BCAP complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1lcz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LCZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LCZ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12055191}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BH7:E-AMINO+BIOTINYL+CAPROIC+ACID'>BH7</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lcz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lcz OCA], [https://pdbe.org/1lcz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lcz RCSB], [https://www.ebi.ac.uk/pdbsum/1lcz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lcz ProSAT]</span></td></tr>
-
[[1lcz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LCZ OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lc/1lcz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lcz ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Avidin|Avidin]]
+
*[[Avidin 3D structures|Avidin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012055191</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Streptomyces avidinii]]
[[Category: Streptomyces avidinii]]
-
[[Category: Bayer, E A.]]
+
[[Category: Bayer EA]]
-
[[Category: Livnah, O.]]
+
[[Category: Livnah O]]
-
[[Category: Pazy, Y.]]
+
[[Category: Pazy Y]]
-
[[Category: Wilchek, M.]]
+
[[Category: Wilchek M]]
-
[[Category: Avidin]]
+
-
[[Category: Biotin]]
+
-
[[Category: Ligand exchange]]
+
-
[[Category: Streptavidin]]
+
-
[[Category: Unknown function]]
+

Current revision

streptavidin-BCAP complex

PDB ID 1lcz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools