This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2wj8
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2wj8.png|left|200px]] | ||
| - | + | ==Respiratory Syncitial Virus RiboNucleoProtein== | |
| - | + | <StructureSection load='2wj8' size='340' side='right'caption='[[2wj8]], [[Resolution|resolution]] 3.29Å' scene=''> | |
| - | === | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2wj8]] is a 40 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)] and [https://en.wikipedia.org/wiki/Human_respiratory_syncytial_virus_A_strain_Long Human respiratory syncytial virus A strain Long]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WJ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WJ8 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.29Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BO4:BORATE+ION'>BO4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wj8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wj8 OCA], [https://pdbe.org/2wj8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wj8 RCSB], [https://www.ebi.ac.uk/pdbsum/2wj8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wj8 ProSAT]</span></td></tr> |
| - | [[2wj8]] is a 40 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/NCAP_HRSVA NCAP_HRSVA] Encapsidates the genome, protecting it from nucleases. The nucleocapsid (NC) has a helical structure. The encapsidated genomic RNA is termed the NC and serves as template for transcription and replication. During replication, encapsidation by protein N is coupled to RNA synthesis and all replicative products are resistant to nucleases.<ref>PMID:9299631</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wj/2wj8_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wj8 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Nucleoprotein|Nucleoprotein]] | + | *[[Laminin|Laminin]] |
| - | + | *[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]] | |
| - | == | + | == References == |
| - | < | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Bedouelle | + | [[Category: Human respiratory syncytial virus A strain Long]] |
| - | [[Category: Bhella | + | [[Category: Large Structures]] |
| - | [[Category: Bricogne | + | [[Category: Bedouelle H]] |
| - | [[Category: Castagne | + | [[Category: Bhella D]] |
| - | [[Category: Damier-Piolle | + | [[Category: Bricogne G]] |
| - | [[Category: Duquerroy | + | [[Category: Castagne N]] |
| - | [[Category: Eleouet | + | [[Category: Damier-Piolle L]] |
| - | [[Category: | + | [[Category: Duquerroy S]] |
| - | [[Category: Rey | + | [[Category: Eleouet J]] |
| - | [[Category: Tawar | + | [[Category: MacLellan K]] |
| - | [[Category: Varela | + | [[Category: Rey FA]] |
| - | [[Category: Vonrhein | + | [[Category: Tawar RG]] |
| - | + | [[Category: Varela PF]] | |
| - | + | [[Category: Vonrhein C]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Respiratory Syncitial Virus RiboNucleoProtein
| |||||||||||

