1q5m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:13, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1q5m.png|left|200px]]
 
-
{{STRUCTURE_1q5m| PDB=1q5m | SCENE= }}
+
==Binary complex of rabbit 20alpha-hydroxysteroid dehydrogenase with NADPH==
-
 
+
<StructureSection load='1q5m' size='340' side='right'caption='[[1q5m]], [[Resolution|resolution]] 1.32&Aring;' scene=''>
-
===Binary complex of rabbit 20alpha-hydroxysteroid dehydrogenase with NADPH===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1q5m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q5M FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15123423}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.32&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q5m OCA], [https://pdbe.org/1q5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q5m RCSB], [https://www.ebi.ac.uk/pdbsum/1q5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q5m ProSAT]</span></td></tr>
-
[[1q5m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5M OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PE2R_RABIT PE2R_RABIT] Can convert prostaglandin E2 to prostaglandin F2-alpha.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q5/1q5m_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q5m ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Hydroxysteroid dehydrogenase|Hydroxysteroid dehydrogenase]]
+
*[[Hydroxysteroid dehydrogenase 3D structures|Hydroxysteroid dehydrogenase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015123423</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
-
[[Category: Breton, R.]]
+
[[Category: Breton R]]
-
[[Category: Cantin, L.]]
+
[[Category: Cantin L]]
-
[[Category: Couture, J F.]]
+
[[Category: Couture JF]]
-
[[Category: Labrie, F.]]
+
[[Category: Labrie F]]
-
[[Category: Legrand, P.]]
+
[[Category: Legrand P]]
-
[[Category: Luu-The, V.]]
+
[[Category: Luu-The V]]
-
[[Category: Aldo-keto reductase]]
+
-
[[Category: Hsd]]
+
-
[[Category: Hydroxysteroid dehydrogenase]]
+
-
[[Category: Nadph]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Binary complex of rabbit 20alpha-hydroxysteroid dehydrogenase with NADPH

PDB ID 1q5m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools