1xx6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:40, 21 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xx6.png|left|200px]]
 
-
{{STRUCTURE_1xx6| PDB=1xx6 | SCENE= }}
+
==X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.==
-
 
+
<StructureSection load='1xx6' size='340' side='right'caption='[[1xx6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1xx6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum_ATCC_824 Clostridium acetobutylicum ATCC 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XX6 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[1xx6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX6 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xx6 OCA], [https://pdbe.org/1xx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xx6 RCSB], [https://www.ebi.ac.uk/pdbsum/1xx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xx6 ProSAT], [https://www.topsan.org/Proteins/NESGC/1xx6 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KITH_CLOAB KITH_CLOAB]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xx6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xx6 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Thymidine kinase|Thymidine kinase]]
+
*[[Thymidine kinase 3D structures|Thymidine kinase 3D structures]]
-
[[Category: Clostridium acetobutylicum]]
+
__TOC__
-
[[Category: Thymidine kinase]]
+
</StructureSection>
-
[[Category: Abashidze, M.]]
+
[[Category: Clostridium acetobutylicum ATCC 824]]
-
[[Category: Acton, T B.]]
+
[[Category: Large Structures]]
-
[[Category: Forouhar, F.]]
+
[[Category: Abashidze M]]
-
[[Category: Hunt, J F.]]
+
[[Category: Acton TB]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Forouhar F]]
-
[[Category: Ma, L C.]]
+
[[Category: Hunt JF]]
-
[[Category: Montelione, G T.]]
+
[[Category: Kuzin AP]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Ma L-C]]
-
[[Category: Tong, L.]]
+
[[Category: Montelione GT]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Tong L]]
-
[[Category: Xiao, R.]]
+
[[Category: Vorobiev SM]]
-
[[Category: Dna synthesis]]
+
[[Category: Xiao R]]
-
[[Category: Kinase]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Thymidine]]
+
-
[[Category: Transferase]]
+

Current revision

X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.

PDB ID 1xx6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools