This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kkp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:48, 9 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kkp.png|left|200px]]
 
-
{{STRUCTURE_2kkp| PDB=2kkp | SCENE= }}
+
==Solution NMR structure of the phage integrase SAM-like Domain from Moth 1796 from Moorella thermoacetica. Northeast Structural Genomics Consortium Target MtR39K (residues 64-171).==
-
 
+
<StructureSection load='2kkp' size='340' side='right'caption='[[2kkp]]' scene=''>
-
===Solution NMR structure of the phage integrase SAM-like Domain from Moth 1796 from Moorella thermoacetica. Northeast Structural Genomics Consortium Target MtR39K (residues 64-171).===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kkp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Moorella_thermoacetica_ATCC_39073 Moorella thermoacetica ATCC 39073]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKP FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kkp OCA], [https://pdbe.org/2kkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kkp RCSB], [https://www.ebi.ac.uk/pdbsum/2kkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kkp ProSAT], [https://www.topsan.org/Proteins/NESGC/2kkp TOPSAN]</span></td></tr>
-
[[2kkp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica_atcc_39073 Moorella thermoacetica atcc 39073]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKP OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q2RHJ2_MOOTA Q2RHJ2_MOOTA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kkp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kkp ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Phage integrase|Phage integrase]]
+
*[[Retroviral integrase 3D structures|Retroviral integrase 3D structures]]
-
[[Category: Moorella thermoacetica atcc 39073]]
+
__TOC__
-
[[Category: Acton, T B.]]
+
</StructureSection>
-
[[Category: Ciccosanti, C.]]
+
[[Category: Large Structures]]
-
[[Category: Everett, J K.]]
+
[[Category: Moorella thermoacetica ATCC 39073]]
-
[[Category: Jang, M.]]
+
[[Category: Acton TB]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Montelione, G T.]]
+
[[Category: Everett JK]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Jang M]]
-
[[Category: Nair, R.]]
+
[[Category: Kennedy MA]]
-
[[Category: Ramelot, T A.]]
+
[[Category: Montelione GT]]
-
[[Category: Rost, B.]]
+
[[Category: Nair R]]
-
[[Category: Swapna, G.]]
+
[[Category: Ramelot TA]]
-
[[Category: Wang, H.]]
+
[[Category: Rost B]]
-
[[Category: Xiao, R.]]
+
[[Category: Swapna G]]
-
[[Category: Alpha-helical bundle]]
+
[[Category: Wang H]]
-
[[Category: Dna binding protein]]
+
[[Category: Xiao R]]
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Sam-like domain]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Solution NMR structure of the phage integrase SAM-like Domain from Moth 1796 from Moorella thermoacetica. Northeast Structural Genomics Consortium Target MtR39K (residues 64-171).

PDB ID 2kkp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kkp"
Personal tools