2vnm

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[[Image:2vnm.png|left|200px]]
 
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{{STRUCTURE_2vnm| PDB=2vnm | SCENE= }}
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==Human BACE-1 in complex with 3-(1,1-dioxidotetrahydro-2H-1,2-thiazin- 2-yl)-5-(ethylamino)-N-((1S,2R)-2-hydroxy-1-(phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino)propyl)benzamide==
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<StructureSection load='2vnm' size='340' side='right'caption='[[2vnm]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2vnm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VNM FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CM8:N-[(1S,2R)-1-BENZYL-2-HYDROXY-3-{[3-(TRIFLUOROMETHYL)BENZYL]AMINO}PROPYL]-3-(1,1-DIOXIDO-1,2-THIAZINAN-2-YL)-5-(ETHYLAMINO)BENZAMIDE'>CM8</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vnm OCA], [https://pdbe.org/2vnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vnm RCSB], [https://www.ebi.ac.uk/pdbsum/2vnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vnm ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vn/2vnm_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vnm ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACE-1 inhibition has the potential to provide a disease-modifying therapy for the treatment of Alzheimer's disease. Optimization of a first generation of BACE-1 inhibitors led to the discovery of novel hydroxyethylamines (HEAs) bearing a tricyclic nonprime side. These derivatives have nanomolar cell potency and are orally bioavailable.
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===HUMAN BACE-1 IN COMPLEX WITH 3-(1,1-DIOXIDOTETRAHYDRO-2H-1, 2-THIAZIN-2-YL)-5-(ETHYLAMINO)-N-((1S,2R)-2-HYDROXY-1-(PHENYLMETHYL)-3-(((3-(TRIFLUOROMETHYL)PHENYL)METHYL)AMINO) PROPYL)BENZAMIDE===
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Second Generation of Hydroxyethylamine BACE-1 Inhibitors: Optimizing Potency and Oral Bioavailability.,Charrier N, Clarke B, Cutler L, Demont E, Dingwall C, Dunsdon R, East P, Hawkins J, Howes C, Hussain I, Jeffrey P, Maile G, Matico R, Mosley J, Naylor A, O'Brien A, Redshaw S, Rowland P, Soleil V, Smith KJ, Sweitzer S, Theobald P, Vesey D, Walter DS, Wayne G J Med Chem. 2008 May 6;. PMID:18457381<ref>PMID:18457381</ref>
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{{ABSTRACT_PUBMED_18457381}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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==About this Structure==
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<div class="pdbe-citations 2vnm" style="background-color:#fffaf0;"></div>
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[[2vnm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNM OCA].
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==See Also==
==See Also==
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*[[Beta secretase|Beta secretase]]
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*[[Beta secretase 3D structures|Beta secretase 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:018457381</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Memapsin 2]]
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[[Category: Large Structures]]
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[[Category: Charrier, N.]]
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[[Category: Charrier N]]
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[[Category: Clarke, B.]]
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[[Category: Clarke B]]
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[[Category: Cutler, L.]]
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[[Category: Cutler L]]
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[[Category: Demont, E.]]
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[[Category: Demont E]]
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[[Category: Dingwall, C.]]
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[[Category: Dingwall C]]
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[[Category: Dunsdon, R.]]
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[[Category: Dunsdon R]]
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[[Category: East, P.]]
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[[Category: East P]]
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[[Category: Hawkins, J.]]
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[[Category: Hawkins J]]
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[[Category: Howes, C.]]
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[[Category: Howes C]]
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[[Category: Hussain, I.]]
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[[Category: Hussain I]]
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[[Category: Jeffrey, P.]]
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[[Category: Jeffrey P]]
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[[Category: Maile, G.]]
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[[Category: Maile G]]
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[[Category: Matico, R.]]
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[[Category: Matico R]]
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[[Category: Mosley, J.]]
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[[Category: Mosley J]]
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[[Category: Naylor, A.]]
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[[Category: Naylor A]]
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[[Category: Obrien, A.]]
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[[Category: OBrien A]]
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[[Category: Redshaw, S.]]
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[[Category: Redshaw S]]
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[[Category: Rowland, P.]]
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[[Category: Rowland P]]
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[[Category: Smith, K J.]]
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[[Category: Smith KJ]]
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[[Category: Soleil, V.]]
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[[Category: Soleil V]]
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[[Category: Sweitzer, S.]]
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[[Category: Sweitzer S]]
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[[Category: Theobald, P.]]
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[[Category: Theobald P]]
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[[Category: Vesey, D.]]
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[[Category: Vesey D]]
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[[Category: Walter, D S.]]
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[[Category: Walter DS]]
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[[Category: Wayne, G.]]
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[[Category: Wayne G]]
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[[Category: Asp-2]]
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[[Category: Aspartyl protease]]
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[[Category: Bace-1]]
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[[Category: Beta-secretase]]
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[[Category: Beta-site app cleaving enzyme]]
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[[Category: Glycoprotein]]
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[[Category: Hydrolase]]
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[[Category: Memapsin-2]]
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[[Category: Membrane]]
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[[Category: Protease]]
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[[Category: Transmembrane]]
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[[Category: Zymogen]]
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Current revision

Human BACE-1 in complex with 3-(1,1-dioxidotetrahydro-2H-1,2-thiazin- 2-yl)-5-(ethylamino)-N-((1S,2R)-2-hydroxy-1-(phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino)propyl)benzamide

PDB ID 2vnm

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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