2z5h
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2z5h.png|left|200px]] | ||
| - | + | ==Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT== | |
| - | + | <StructureSection load='2z5h' size='340' side='right'caption='[[2z5h]], [[Resolution|resolution]] 2.89Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2z5h]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus], [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z5H FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.89Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z5h OCA], [https://pdbe.org/2z5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z5h RCSB], [https://www.ebi.ac.uk/pdbsum/2z5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z5h ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[2z5h]] is a 10 chain structure with sequence from [ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.[https://www.uniprot.org/uniprot/TPM1_RABIT TPM1_RABIT] Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z5h_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z5h ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Tropomyosin|Tropomyosin]] | + | *[[Gcn4 3D Structures|Gcn4 3D Structures]] |
| - | *[[Troponin|Troponin]] | + | *[[Gnc4 3D Structures|Gnc4 3D Structures]] |
| - | + | *[[Tropomyosin 3D structures|Tropomyosin 3D structures]] | |
| - | + | *[[Troponin 3D structures|Troponin 3D structures]] | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
[[Category: Gallus gallus]] | [[Category: Gallus gallus]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Oryctolagus cuniculus]] | [[Category: Oryctolagus cuniculus]] | ||
[[Category: Saccharomyces cerevisiae]] | [[Category: Saccharomyces cerevisiae]] | ||
| - | [[Category: Igarashi | + | [[Category: Igarashi N]] |
| - | [[Category: Kudou | + | [[Category: Kudou N]] |
| - | [[Category: Murakami | + | [[Category: Murakami K]] |
| - | [[Category: Nozawa | + | [[Category: Nozawa K]] |
| - | [[Category: Shirakihara | + | [[Category: Shirakihara Y]] |
| - | [[Category: Stewart | + | [[Category: Stewart M]] |
| - | [[Category: Tomii | + | [[Category: Tomii K]] |
| - | [[Category: Wakabayashi | + | [[Category: Wakabayashi T]] |
| - | [[Category: Wakatsuki | + | [[Category: Wakatsuki S]] |
| - | [[Category: Yasunaga | + | [[Category: Yasunaga T]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT
| |||||||||||
