This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3rrh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:34, 14 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3rrh.png|left|200px]]
 
-
{{STRUCTURE_3rrh| PDB=3rrh | SCENE= }}
+
==Ternary Structure of the large fragment of Taq DNA polymerase bound to an abasic site and a ddTTP==
-
 
+
<StructureSection load='3rrh' size='340' side='right'caption='[[3rrh]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Ternary Structure of the large fragment of Taq DNA polymerase bound to an abasic site and a ddTTP===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3rrh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RRH FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22318723}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2DT:3-DEOXYTHYMIDINE-5-MONOPHOSPHATE'>2DT</scene>, <scene name='pdbligand=3DR:1,2-DIDEOXYRIBOFURANOSE-5-PHOSPHATE'>3DR</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=TTP:THYMIDINE-5-TRIPHOSPHATE'>TTP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rrh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rrh OCA], [https://pdbe.org/3rrh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rrh RCSB], [https://www.ebi.ac.uk/pdbsum/3rrh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rrh ProSAT]</span></td></tr>
-
[[3rrh]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRH OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DPO1_THEAQ DPO1_THEAQ]
==See Also==
==See Also==
-
*[[DNA polymerase|DNA polymerase]]
+
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022318723</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: DNA-directed DNA polymerase]]
+
[[Category: Thermus aquaticus]]
[[Category: Thermus aquaticus]]
-
[[Category: Diederichs, K.]]
+
[[Category: Diederichs K]]
-
[[Category: Marx, A.]]
+
[[Category: Marx A]]
-
[[Category: Obeid, S.]]
+
[[Category: Obeid S]]
-
[[Category: A-rule]]
+
-
[[Category: Abasic site]]
+
-
[[Category: Dna polymerase]]
+
-
[[Category: Transferase-dna complex]]
+
-
[[Category: Translesion synthesis]]
+

Current revision

Ternary Structure of the large fragment of Taq DNA polymerase bound to an abasic site and a ddTTP

PDB ID 3rrh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3rrh"
Personal tools