This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sqj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sqj.png|left|200px]]
 
-
{{STRUCTURE_1sqj| PDB=1sqj | SCENE= }}
+
==Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH)==
-
 
+
<StructureSection load='1sqj' size='340' side='right'caption='[[1sqj]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1sqj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geotrichum_sp._M128 Geotrichum sp. M128]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SQJ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15242597}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sqj OCA], [https://pdbe.org/1sqj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sqj RCSB], [https://www.ebi.ac.uk/pdbsum/1sqj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sqj ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1sqj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geotrichum_sp._m128 Geotrichum sp. m128]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQJ OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/CBHRE_GEOS1 CBHRE_GEOS1]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sq/1sqj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sqj ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cellobiohydrolase|Cellobiohydrolase]]
+
*[[Cellobiohydrolase 3D structures|Cellobiohydrolase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015242597</ref><ref group="xtra">PMID:012374797</ref><ref group="xtra">PMID:014501131</ref><references group="xtra"/>
+
[[Category: Geotrichum sp. M128]]
-
[[Category: Geotrichum sp. m128]]
+
[[Category: Large Structures]]
-
[[Category: Oligoxyloglucan reducing-end-specific cellobiohydrolase]]
+
[[Category: Kondo H]]
-
[[Category: Kondo, H.]]
+
[[Category: Mitsuishi Y]]
-
[[Category: Mitsuishi, Y.]]
+
[[Category: Noro N]]
-
[[Category: Noro, N.]]
+
[[Category: Suzuki M]]
-
[[Category: Suzuki, M.]]
+
[[Category: Tsuda S]]
-
[[Category: Tsuda, S.]]
+
[[Category: Yaoi K]]
-
[[Category: Yaoi, K.]]
+
-
[[Category: Beta-propeller]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH)

PDB ID 1sqj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools