1smx
From Proteopedia
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| - | [[Image:1smx.png|left|200px]] | ||
| - | + | ==Crystal structure of the S1 domain of RNase E from E. coli (native)== | |
| - | + | <StructureSection load='1smx' size='340' side='right'caption='[[1smx]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1smx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SMX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SMX FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1smx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1smx OCA], [https://pdbe.org/1smx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1smx RCSB], [https://www.ebi.ac.uk/pdbsum/1smx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1smx ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1smx]] is a 2 chain structure with sequence from [ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/RNE_ECOLI RNE_ECOLI] Matures 5S rRNA from its precursors from all the rRNA genes. It also cleaves RNA I, a molecule that controls the replication of colE1 plasmid DNA. It is the major endoribonuclease participating in mRNA turnover in E.coli. It initiates the decay of RNAs by cutting them internally near their 5'-end. It is able to remove poly(A) tails by an endonucleolytic process. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sm/1smx_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1smx ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Ribonuclease|Ribonuclease]] | + | *[[Ribonuclease 3D structures|Ribonuclease 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: Cook | + | [[Category: Large Structures]] |
| - | [[Category: Edge | + | [[Category: Cook MA]] |
| - | [[Category: Lario | + | [[Category: Edge RE]] |
| - | [[Category: Mackie | + | [[Category: Lario P]] |
| - | [[Category: McIntosh | + | [[Category: Mackie GA]] |
| - | [[Category: Schubert | + | [[Category: McIntosh LP]] |
| - | [[Category: Strynadka | + | [[Category: Schubert M]] |
| - | + | [[Category: Strynadka NCJ]] | |
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| - | + | ||
Current revision
Crystal structure of the S1 domain of RNase E from E. coli (native)
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