1ud6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:16, 3 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ud6.png|left|200px]]
 
-
{{STRUCTURE_1ud6| PDB=1ud6 | SCENE= }}
+
==Crystal structure of AmyK38 with potassium ion==
-
 
+
<StructureSection load='1ud6' size='340' side='right'caption='[[1ud6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
===Crystal structure of AmyK38 with potassium ion===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1ud6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._KSM-K38 Bacillus sp. KSM-K38]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD6 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12719434}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud6 OCA], [https://pdbe.org/1ud6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud6 ProSAT]</span></td></tr>
-
[[1ud6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ksm-k38 Bacillus sp. ksm-k38]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD6 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q93I48_9BACI Q93I48_9BACI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ud6 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Alpha-Amylase|Alpha-Amylase]]
+
*[[Amylase 3D structures|Amylase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012719434</ref><references group="xtra"/>
+
[[Category: Bacillus sp. KSM-K38]]
-
[[Category: Alpha-amylase]]
+
[[Category: Large Structures]]
-
[[Category: Bacillus sp. ksm-k38]]
+
[[Category: Fujihashi M]]
-
[[Category: Fujihashi, M.]]
+
[[Category: Hagihara H]]
-
[[Category: Hagihara, H.]]
+
[[Category: Ito S]]
-
[[Category: Ito, S.]]
+
[[Category: Kita A]]
-
[[Category: Kita, A.]]
+
[[Category: Miki K]]
-
[[Category: Miki, K.]]
+
[[Category: Nonaka T]]
-
[[Category: Nonaka, T.]]
+
[[Category: Ozaki K]]
-
[[Category: Ozaki, K.]]
+
-
[[Category: Alkaline]]
+
-
[[Category: Alpha-amylase]]
+
-
[[Category: Calcium-free]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of AmyK38 with potassium ion

PDB ID 1ud6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ud6"
Personal tools