2r1g
From Proteopedia
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- | [[Image:2r1g.png|left|200px]] | ||
- | + | ==Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex== | |
- | + | <SX load='2r1g' size='340' side='right' viewer='molstar' caption='[[2r1g]], [[Resolution|resolution]] 12.50Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2r1g]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1G FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.5Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1g OCA], [https://pdbe.org/2r1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1g RCSB], [https://www.ebi.ac.uk/pdbsum/2r1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1g ProSAT]</span></td></tr> | |
- | == | + | </table> |
- | [[2r1g]] is a 10 chain structure with sequence from [ | + | == Function == |
+ | [https://www.uniprot.org/uniprot/RS9_THET2 RS9_THET2] Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA (By similarity). | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1g_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r1g ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
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*[[Ribosomal protein S13|Ribosomal protein S13]] | *[[Ribosomal protein S13|Ribosomal protein S13]] | ||
*[[Ribosomal protein S9|Ribosomal protein S9]] | *[[Ribosomal protein S9|Ribosomal protein S9]] | ||
- | + | __TOC__ | |
- | + | </SX> | |
- | + | [[Category: Large Structures]] | |
- | [[Category: Thermus thermophilus]] | + | [[Category: Synthetic construct]] |
- | [[Category: Agrawal | + | [[Category: Thermus thermophilus HB27]] |
- | [[Category: Booth | + | [[Category: Agrawal RK]] |
- | [[Category: Datta | + | [[Category: Booth TM]] |
- | [[Category: Fucini | + | [[Category: Datta PP]] |
- | [[Category: Kaminishi | + | [[Category: Fucini P]] |
- | [[Category: Kawazoe | + | [[Category: Kaminishi T]] |
- | [[Category: Sharma | + | [[Category: Kawazoe M]] |
- | [[Category: Swami | + | [[Category: Sharma MR]] |
- | [[Category: Takemoto | + | [[Category: Swami NK]] |
- | [[Category: Wilson | + | [[Category: Takemoto C]] |
- | [[Category: Yokoyama | + | [[Category: Wilson DN]] |
- | + | [[Category: Yokoyama S]] | |
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Current revision
Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex
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