This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1m9y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:42, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1m9y.png|left|200px]]
 
-
{{STRUCTURE_1m9y| PDB=1m9y | SCENE= }}
+
==X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,G89A Complex.==
-
 
+
<StructureSection load='1m9y' size='340' side='right'caption='[[1m9y]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,G89A Complex.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1m9y]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M9Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M9Y FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12730686}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m9y OCA], [https://pdbe.org/1m9y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m9y RCSB], [https://www.ebi.ac.uk/pdbsum/1m9y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m9y ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1m9y]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M9Y OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/PPIA_HUMAN PPIA_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m9/1m9y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m9y ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cyclophilin|Cyclophilin]]
+
*[[Cyclophilin 3D structures|Cyclophilin 3D structures]]
-
*[[Virus coat protein|Virus coat protein]]
+
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012730686</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Human immunodeficiency virus 1]]
[[Category: Human immunodeficiency virus 1]]
-
[[Category: Peptidylprolyl isomerase]]
+
[[Category: Large Structures]]
-
[[Category: Hill, C P.]]
+
[[Category: Hill CP]]
-
[[Category: Howard, B R.]]
+
[[Category: Howard BR]]
-
[[Category: Li, S.]]
+
[[Category: Li S]]
-
[[Category: Sundquist, W I.]]
+
[[Category: Sundquist WI]]
-
[[Category: Vajdos, F F.]]
+
[[Category: Vajdos FF]]
-
[[Category: Capsid]]
+
-
[[Category: Cyclophilin some]]
+
-
[[Category: Hiv-1]]
+
-
[[Category: Isomerase-viral protein complex]]
+
-
[[Category: Rotamase]]
+

Current revision

X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,G89A Complex.

PDB ID 1m9y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools