This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gwu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:09, 13 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gwu.png|left|200px]]
 
-
{{STRUCTURE_1gwu| PDB=1gwu | SCENE= }}
+
==RECOMBINANT HORSERADISH PEROXIDASE C1A ALA140GLY==
-
 
+
<StructureSection load='1gwu' size='340' side='right'caption='[[1gwu]], [[Resolution|resolution]] 1.31&Aring;' scene=''>
-
===RECOMBINANT HORSERADISH PEROXIDASE C1A ALA140GLY===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1gwu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GWU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GWU FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10574977}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.31&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gwu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gwu OCA], [https://pdbe.org/1gwu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gwu RCSB], [https://www.ebi.ac.uk/pdbsum/1gwu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gwu ProSAT]</span></td></tr>
-
[[1gwu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GWU OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/1gwu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gwu ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Horseradish peroxidase|Horseradish peroxidase]]
*[[Horseradish peroxidase|Horseradish peroxidase]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:010574977</ref><ref group="xtra">PMID:009609699</ref><ref group="xtra">PMID:015299344</ref><references group="xtra"/>
+
[[Category: Armoracia rusticana]]
[[Category: Armoracia rusticana]]
-
[[Category: Peroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Brissett, N.]]
+
[[Category: Brissett N]]
-
[[Category: Gajhede, M.]]
+
[[Category: Gajhede M]]
-
[[Category: Henriksen, A.]]
+
[[Category: Henriksen A]]
-
[[Category: Glycoprotein]]
+
-
[[Category: Heme]]
+
-
[[Category: Multigene family]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxidase]]
+
-
[[Category: Signal]]
+

Current revision

RECOMBINANT HORSERADISH PEROXIDASE C1A ALA140GLY

PDB ID 1gwu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools