This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1w6z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:18, 13 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1w6z.png|left|200px]]
 
-
{{STRUCTURE_1w6z| PDB=1w6z | SCENE= }}
+
==High Energy Tetragonal Lysozyme X-ray Structure==
-
 
+
<StructureSection load='1w6z' size='340' side='right'caption='[[1w6z]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
===HIGH ENERGY TETRAGONAL LYSOZYME X-RAY STRUCTURE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1w6z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W6Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W6Z FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HO3:HOLMIUM+(III)+ATOM'>HO3</scene></td></tr>
-
[[1w6z]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W6Z OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w6z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w6z OCA], [https://pdbe.org/1w6z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w6z RCSB], [https://www.ebi.ac.uk/pdbsum/1w6z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w6z ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w6/1w6z_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1w6z ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Hen Egg-White (HEW) Lysozyme|Hen Egg-White (HEW) Lysozyme]]
+
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
-
[[Category: Lysozyme]]
+
== References ==
-
[[Category: Aslantas, M.]]
+
<references/>
-
[[Category: Dimichiel, M.]]
+
__TOC__
-
[[Category: Honkimaki, V.]]
+
</StructureSection>
-
[[Category: Jakoncic, J.]]
+
[[Category: Gallus gallus]]
-
[[Category: Stojanoff, V.]]
+
[[Category: Large Structures]]
-
[[Category: Bacteriolytic enzyme]]
+
[[Category: Aslantas M]]
-
[[Category: Energy]]
+
[[Category: Di Michiel M]]
-
[[Category: Glycosidase]]
+
[[Category: Honkimaki V]]
-
[[Category: High]]
+
[[Category: Jakoncic J]]
-
[[Category: Holmium]]
+
[[Category: Stojanoff V]]
-
[[Category: Hydrolase]]
+
-
[[Category: Kedge]]
+
-
[[Category: Lysozyme]]
+

Current revision

High Energy Tetragonal Lysozyme X-ray Structure

PDB ID 1w6z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools