2pg0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pg0.png|left|200px]]
 
-
{{STRUCTURE_2pg0| PDB=2pg0 | SCENE= }}
+
==Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus==
-
 
+
<StructureSection load='2pg0' size='340' side='right'caption='[[2pg0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2pg0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PG0 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
[[2pg0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PG0 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pg0 OCA], [https://pdbe.org/2pg0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pg0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pg0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pg0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pg0 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5L0D5_GEOKA Q5L0D5_GEOKA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pg0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pg0 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Acyl-CoA dehydrogenase|Acyl-CoA dehydrogenase]]
+
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
-
[[Category: Acyl-CoA dehydrogenase]]
+
__TOC__
-
[[Category: Geobacillus kaustophilus]]
+
</StructureSection>
-
[[Category: Chen, L-Q.]]
+
[[Category: Geobacillus kaustophilus HTA426]]
-
[[Category: Chen, L.]]
+
[[Category: Large Structures]]
-
[[Category: Ebihara, A.]]
+
[[Category: Chen L]]
-
[[Category: Fu, Z-Q.]]
+
[[Category: Chen L-Q]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Ebihara A]]
-
[[Category: Li, Y.]]
+
[[Category: Fu Z-Q]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Rose, J P.]]
+
[[Category: Li Y]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Rose JP]]
-
[[Category: Shinkai, A.]]
+
[[Category: Shinkai A]]
-
[[Category: Wang, B-C.]]
+
[[Category: Wang B-C]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Yokoyama S]]
-
[[Category: Zhao, M.]]
+
[[Category: Zhao M]]
-
[[Category: Acyl-coa dehydrogenase]]
+
-
[[Category: Geobacillus kaustophilus hta426]]
+
-
[[Category: Gk1316]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Secsg]]
+
-
[[Category: Southeast collaboratory for structural genomic]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus

PDB ID 2pg0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools